source/unres/src_MD-restraints-PM/COMMON.MD

   1       double precision  gcart, gxcart, gradcag,gradxag
   2       common /mdgrad/ gcart(3,0:MAXRES), gxcart(3,0:MAXRES),
   3      & gradcag(3,MAXRES),gradxag(3,MAXRES)
   4        integer dimen,dimen1, dimen3, ifrag(2,50,maxprocs/20),
   5      &                       ipair(2,100,maxprocs/20),iset,
   6      &                       mset(maxprocs/20),nset
   7        double precision IP,ISC(ntyp+1),mp,
   8      & msc(ntyp+1),d_t_work(MAXRES6),
   9      & d_t_work_new(MAXRES6),d_t(3,0:MAXRES2),d_t_new(3,0:MAXRES2),
  10      & d_af_work(MAXRES6),d_as_work(MAXRES6),
  11      & d_t_old(3,0:MAXRES2),d_a_old(3,0:MAXRES2),d_a_short(3,0:MAXRES2),
  12      & Gmat(MAXRES2,MAXRES2),Ginv(MAXRES2,MAXRES2),A(MAXRES2,MAXRES2),
  13      & d_a(3,0:MAXRES2),d_a_work(6*MAXRES),kinetic_force(MAXRES6),
  14      & Gsqrp(MAXRES2,MAXRES2),Gsqrm(MAXRES2,MAXRES2),
  15      & vtot(MAXRES2),Gvec(maxres2,maxres2),Geigen(maxres2)
  16
  17        real*8 sigma_dih(799,19), odl(799,799,19), dih(799,19),
  18      &        sigma_odl(799,799,19)
  19
  20        double precision v_ini,d_time,d_time0,t_bath,tau_bath,
  21      & EK,potE,potEcomp(0:n_ene+4),totE,totT,amax,kinetic_T,dvmax,damax,
  22      & edriftmax,
  23      & eq_time,wfrag(50,maxprocs/20),wpair(100,maxprocs/20),
  24      & qfrag(50),qpair(100),
  25      & qinfrag(50,maxprocs/20),qinpair(100,maxprocs/20),
  26      & Ucdfrag,Ucdpair,dUdconst(3,0:MAXRES),Uconst,ehomology_constr,
  27      & dUdxconst(3,0:MAXRES),dqwol(3,0:MAXRES),dxqwol(3,0:MAXRES),
  28      & utheta(maxfrag_back),ugamma(maxfrag_back),uscdiff(maxfrag_back),
  29      & dutheta(maxres),dugamma(maxres),duscdiff(3,maxres),
  30      & duscdiffx(3,maxres),wfrag_back(3,maxfrag_back,maxprocs/20),
  31      & uconst_back
  32       integer n_timestep,ntwx,ntwe,lang,count_reset_moment,
  33      & count_reset_vel,reset_fricmat,nfrag,npair,nfrag_back,
  34      & ifrag_back(3,maxfrag_back,maxprocs/20),ntime_split,ntime_split0,
  35      & maxtime_split, lim_odl, lim_dih
  36       integer nresn,nyosh,nnos
  37       double precision glogs,qmass,vlogs,xlogs
  38       logical large,print_compon,tbf,rest,reset_moment,reset_vel,
  39      & surfarea,rattle,usampl,mdpdb,RESPA,tnp,tnp1,tnh,xiresp
  40       integer igmult_start,igmult_end,my_ng_count,ng_start,ng_counts,
  41      & nginv_start,nginv_counts,myginv_ng_count
  42       common /back_constr/ uconst_back,utheta,ugamma,uscdiff,
  43      & dutheta,dugamma,duscdiff,duscdiffx,lim_odl,lim_dih,
  44      & wfrag_back,nfrag_back,ifrag_back,odl,dih,sigma_dih,sigma_odl
  45       common /qmeas/ qfrag,qpair,qinfrag,qinpair,wfrag,wpair,eq_time,
  46      & Ucdfrag,Ucdpair,dUdconst,dUdxconst,dqwol,dxqwol,Uconst,
  47      & iset,mset,nset,usampl,ifrag,ipair,npair,nfrag
  48       common /mdpar/ v_ini,d_time,d_time0,scal_fric,
  49      & t_bath,tau_bath,dvmax,damax,n_timestep,mdpdb,
  50      & ntime_split,ntime_split0,maxtime_split,
  51      & ntwx,ntwe,large,print_compon,tbf,rest,tnp,tnp1,tnh
  52       common /MDcalc/ totT,totE,potE,potEcomp,EK,amax,edriftmax,
  53      & kinetic_T
  54       common /lagrange/ d_t,d_t_old,d_t_new,d_t_work,
  55      & d_t_work_new,d_a,d_a_old,d_a_work,d_af_work,d_as_work,d_a_short,
  56      & kinetic_force,
  57      & A,Ginv,Gmat,Gvec,Geigen,Gsqrp,Gsqrm,
  58      & vtot,dimen,dimen1,dimen3,lang,
  59      & reset_moment,reset_vel,count_reset_moment,count_reset_vel,
  60      & rattle,RESPA
  61       common /inertia/ IP,ISC,MP,MSC
  62       double precision scal_fric,rwat,etawat,gamp,
  63      & gamsc(ntyp),stdfp,stdfsc(ntyp),stdforcp(MAXRES),
  64      & stdforcsc(MAXRES),pstok,restok(ntyp+1),cPoise,Rb
  65       common /langevin/ pstok,restok,gamp,gamsc,
  66      & stdfp,stdfsc,stdforcp,stdforcsc,rwat,etawat,cPoise,Rb,surfarea,
  67      & reset_fricmat
  68       common /mdpmpi/ igmult_start,igmult_end,my_ng_count,
  69      & myginv_ng_count,
  70      & ng_start(0:MaxProcs-1),ng_counts(0:MaxProcs-1),
  71      & nginv_start(0:MaxProcs),nginv_counts(0:MaxProcs-1)
  72       double precision pi_np,pistar,s_np,s12_np,Q_np,E_old,H0,E_long,
  73      & sold_np,d_t_half,Csplit,hhh
  74       common /nosepoincare/ pi_np,pistar,s_np,s12_np,Q_np,E_old,H0,
  75      & E_long,sold_np,d_t_half(3,0:MAXRES2),Csplit,hhh
  76       common /nosehoover/ glogs(maxmnh),qmass(maxmnh),
  77      &                    vlogs(maxmnh),xlogs(maxmnh),
  78      &                    nresn,nyosh,nnos,xiresp
  79       integer hmc,hmc_acc
  80       double precision dc_hmc,hmc_etot,totThmc
  81       common /hmc_md/ dc_hmc(3,0:maxres2),hmc_etot,totThmc,hmc,hmc_acc