source/unres/src_MD-M/CMakeFiles/CMakeOutput.log

   1 The system is: Linux - 2.6.34.9-69.fc13.x86_64 - x86_64
   2 Compiling the C compiler identification source file "CMakeCCompilerId.c" succeeded.
   3 Compiler: /usr/bin/gcc
   4 Build flags:
   5 Id flags:
   6
   7 The output was:
   8 0
   9
  10
  11 Compilation of the C compiler identification source "CMakeCCompilerId.c" produced "a.out"
  12
  13 The C compiler identification is GNU, found in "/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CompilerIdC/a.out"
  14
  15 Compiling the CXX compiler identification source file "CMakeCXXCompilerId.cpp" succeeded.
  16 Compiler: /usr/bin/c++
  17 Build flags:
  18 Id flags:
  19
  20 The output was:
  21 0
  22 CMakeCXXCompilerId.cpp:73: warning: deprecated conversion from string constant to ‘char*’
  23 CMakeCXXCompilerId.cpp:163: warning: deprecated conversion from string constant to ‘char*’
  24
  25
  26 Compilation of the CXX compiler identification source "CMakeCXXCompilerId.cpp" produced "a.out"
  27
  28 The CXX compiler identification is GNU, found in "/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CompilerIdCXX/a.out"
  29
  30 Determining if the C compiler works passed with the following output:
  31 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
  32
  33 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
  34 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
  35 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
  36 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
  37 Building C object CMakeFiles/cmTryCompileExec.dir/testCCompiler.c.o
  38 /usr/bin/gcc    -o CMakeFiles/cmTryCompileExec.dir/testCCompiler.c.o   -c /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/testCCompiler.c
  39 Linking C executable cmTryCompileExec
  40 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
  41 /usr/bin/gcc        CMakeFiles/cmTryCompileExec.dir/testCCompiler.c.o  -o cmTryCompileExec -rdynamic
  42 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
  43
  44
  45 Detecting C compiler ABI info compiled with the following output:
  46 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
  47
  48 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
  49 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
  50 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
  51 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
  52 Building C object CMakeFiles/cmTryCompileExec.dir/CMakeCCompilerABI.c.o
  53 /usr/bin/gcc    -o CMakeFiles/cmTryCompileExec.dir/CMakeCCompilerABI.c.o   -c /usr/share/cmake/Modules/CMakeCCompilerABI.c
  54 Linking C executable cmTryCompileExec
  55 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
  56 /usr/bin/gcc       -v CMakeFiles/cmTryCompileExec.dir/CMakeCCompilerABI.c.o  -o cmTryCompileExec -rdynamic
  57 Using built-in specs.
  58 Target: x86_64-redhat-linux
  59 Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
  60 Thread model: posix
  61 gcc version 4.4.5 20101112 (Red Hat 4.4.5-2) (GCC)
  62 COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/
  63 LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../:/lib/:/usr/lib/
  64 COLLECT_GCC_OPTIONS='-v' '-o' 'cmTryCompileExec' '-rdynamic' '-mtune=generic'
  65  /usr/libexec/gcc/x86_64-redhat-linux/4.4.5/collect2 --no-add-needed --eh-frame-hdr --build-id -m elf_x86_64 --hash-style=gnu -export-dynamic -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTryCompileExec /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../.. CMakeFiles/cmTryCompileExec.dir/CMakeCCompilerABI.c.o -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o
  66 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
  67
  68
  69 Parsed C implicit link information from above output:
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  71   ignore line: [Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp]
  72   ignore line: []
  73   ignore line: [Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"]
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  75   ignore line: [gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp']
  76   ignore line: [/usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1]
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  80   ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1]
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  82   ignore line: [Using built-in specs.]
  83   ignore line: [Target: x86_64-redhat-linux]
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  85   ignore line: [Thread model: posix]
  86   ignore line: [gcc version 4.4.5 20101112 (Red Hat 4.4.5-2) (GCC) ]
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  88   ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../:/lib/:/usr/lib/]
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 136
 137
 138 Determining if the CXX compiler works passed with the following output:
 139 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
 140
 141 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
 142 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
 143 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 144 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
 145 Building CXX object CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o
 146 /usr/bin/c++     -o CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o -c /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
 147 Linking CXX executable cmTryCompileExec
 148 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
 149 /usr/bin/c++         CMakeFiles/cmTryCompileExec.dir/testCXXCompiler.cxx.o  -o cmTryCompileExec -rdynamic
 150 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 151
 152
 153 Detecting CXX compiler ABI info compiled with the following output:
 154 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
 155
 156 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
 157 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
 158 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 159 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
 160 Building CXX object CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o
 161 /usr/bin/c++     -o CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp
 162 Linking CXX executable cmTryCompileExec
 163 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
 164 /usr/bin/c++        -v CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o  -o cmTryCompileExec -rdynamic
 165 Using built-in specs.
 166 Target: x86_64-redhat-linux
 167 Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
 168 Thread model: posix
 169 gcc version 4.4.5 20101112 (Red Hat 4.4.5-2) (GCC)
 170 COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/
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 172 COLLECT_GCC_OPTIONS='-v' '-o' 'cmTryCompileExec' '-rdynamic' '-shared-libgcc' '-mtune=generic'
 173  /usr/libexec/gcc/x86_64-redhat-linux/4.4.5/collect2 --no-add-needed --eh-frame-hdr --build-id -m elf_x86_64 --hash-style=gnu -export-dynamic -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTryCompileExec /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../.. CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o
 174 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 175
 176
 177 Parsed CXX implicit link information from above output:
 178   link line regex: [^( *|.*[/\])(ld|ld|collect2)[^/\]*( |$)]
 179   ignore line: [Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp]
 180   ignore line: []
 181   ignore line: [Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"]
 182   ignore line: [/usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build]
 183   ignore line: [gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp']
 184   ignore line: [/usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1]
 185   ignore line: [Building CXX object CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o]
 186   ignore line: [/usr/bin/c++     -o CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp]
 187   ignore line: [Linking CXX executable cmTryCompileExec]
 188   ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1]
 189   ignore line: [/usr/bin/c++        -v CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o  -o cmTryCompileExec -rdynamic  ]
 190   ignore line: [Using built-in specs.]
 191   ignore line: [Target: x86_64-redhat-linux]
 192   ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux]
 193   ignore line: [Thread model: posix]
 194   ignore line: [gcc version 4.4.5 20101112 (Red Hat 4.4.5-2) (GCC) ]
 195   ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/]
 196   ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../:/lib/:/usr/lib/]
 197   ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'cmTryCompileExec' '-rdynamic' '-shared-libgcc' '-mtune=generic']
 198   link line: [ /usr/libexec/gcc/x86_64-redhat-linux/4.4.5/collect2 --no-add-needed --eh-frame-hdr --build-id -m elf_x86_64 --hash-style=gnu -export-dynamic -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTryCompileExec /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../.. CMakeFiles/cmTryCompileExec.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o]
 199     arg [/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/collect2] ==> ignore
 200     arg [--no-add-needed] ==> ignore
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 202     arg [--build-id] ==> ignore
 203     arg [-m] ==> ignore
 204     arg [elf_x86_64] ==> ignore
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 208     arg [/lib64/ld-linux-x86-64.so.2] ==> ignore
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 213     arg [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtbegin.o] ==> ignore
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 218     arg [-L/usr/lib/../lib64] ==> dir [/usr/lib/../lib64]
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 226     arg [-lgcc_s] ==> lib [gcc_s]
 227     arg [-lgcc] ==> lib [gcc]
 228     arg [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o] ==> ignore
 229     arg [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o] ==> ignore
 230   remove lib [gcc_s]
 231   remove lib [gcc]
 232   remove lib [gcc_s]
 233   remove lib [gcc]
 234   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.4.5]
 235   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.4.5]
 236   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64] ==> [/usr/lib64]
 237   collapse dir [/lib/../lib64] ==> [/lib64]
 238   collapse dir [/usr/lib/../lib64] ==> [/usr/lib64]
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 241   implicit dirs: [/usr/lib/gcc/x86_64-redhat-linux/4.4.5;/usr/lib64;/lib64;/usr/lib]
 242
 243
 244 Compiling the Fortran compiler identification source file "CMakeFortranCompilerId.F" succeeded.
 245 Compiler: /usr/bin/gfortran
 246 Build flags:
 247 Id flags:
 248
 249 The output was:
 250 0
 251
 252
 253 Compilation of the Fortran compiler identification source "CMakeFortranCompilerId.F" produced "a.out"
 254
 255 The Fortran compiler identification is GNU, found in "/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CompilerIdFortran/a.out"
 256
 257 Determining if the Fortran compiler works passed with the following output:
 258 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
 259
 260 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
 261 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
 262 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 263 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
 264 Building Fortran object CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o
 265 /usr/bin/gfortran  -o CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o   -c /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/testFortranCompiler.f
 266 Linking Fortran executable cmTryCompileExec
 267 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
 268 /usr/bin/gfortran        CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o  -o cmTryCompileExec -rdynamic
 269 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 270
 271
 272 Detecting Fortran compiler ABI info compiled with the following output:
 273 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
 274
 275 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
 276 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
 277 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 278 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
 279 Building Fortran object CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o
 280 /usr/bin/gfortran  -o CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o   -c /usr/share/cmake/Modules/CMakeFortranCompilerABI.F
 281 Linking Fortran executable cmTryCompileExec
 282 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
 283 /usr/bin/gfortran   -v     CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o  -o cmTryCompileExec -rdynamic
 284 Driving: /usr/bin/gfortran -v CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o -o cmTryCompileExec -rdynamic -lgfortranbegin -lgfortran -lm -shared-libgcc
 285 Using built-in specs.
 286 Target: x86_64-redhat-linux
 287 Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
 288 Thread model: posix
 289 gcc version 4.4.5 20101112 (Red Hat 4.4.5-2) (GCC)
 290 COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/:/usr/libexec/gcc/x86_64-redhat-linux/4.4.5/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/
 291 LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../:/lib/:/usr/lib/
 292 COLLECT_GCC_OPTIONS='-v' '-o' 'cmTryCompileExec' '-rdynamic' '-shared-libgcc' '-mtune=generic'
 293  /usr/libexec/gcc/x86_64-redhat-linux/4.4.5/collect2 --no-add-needed --eh-frame-hdr --build-id -m elf_x86_64 --hash-style=gnu -export-dynamic -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o cmTryCompileExec /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtbegin.o -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../.. CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o -lgfortranbegin -lgfortran -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o
 294 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 295
 296
 297 Parsed Fortran implicit link information from above output:
 298   link line regex: [^( *|.*[/\])(ld|ld|collect2)[^/\]*( |$)]
 299   ignore line: [Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp]
 300   ignore line: []
 301   ignore line: [Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"]
 302   ignore line: [/usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build]
 303   ignore line: [gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp']
 304   ignore line: [/usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1]
 305   ignore line: [Building Fortran object CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o]
 306   ignore line: [/usr/bin/gfortran  -o CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o   -c /usr/share/cmake/Modules/CMakeFortranCompilerABI.F]
 307   ignore line: [Linking Fortran executable cmTryCompileExec]
 308   ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1]
 309   ignore line: [/usr/bin/gfortran   -v     CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o  -o cmTryCompileExec -rdynamic  ]
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 311   ignore line: [Using built-in specs.]
 312   ignore line: [Target: x86_64-redhat-linux]
 313   ignore line: [Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux]
 314   ignore line: [Thread model: posix]
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 317   ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../:/lib/:/usr/lib/]
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 338     arg [-L/lib/../lib64] ==> dir [/lib/../lib64]
 339     arg [-L/usr/lib/../lib64] ==> dir [/usr/lib/../lib64]
 340     arg [-L/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../..] ==> dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../..]
 341     arg [CMakeFiles/cmTryCompileExec.dir/CMakeFortranCompilerABI.F.o] ==> ignore
 342     arg [-lgfortranbegin] ==> lib [gfortranbegin]
 343     arg [-lgfortran] ==> lib [gfortran]
 344     arg [-lm] ==> lib [m]
 345     arg [-lgcc_s] ==> lib [gcc_s]
 346     arg [-lgcc] ==> lib [gcc]
 347     arg [-lc] ==> lib [c]
 348     arg [-lgcc_s] ==> lib [gcc_s]
 349     arg [-lgcc] ==> lib [gcc]
 350     arg [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/crtend.o] ==> ignore
 351     arg [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64/crtn.o] ==> ignore
 352   remove lib [gcc_s]
 353   remove lib [gcc]
 354   remove lib [gcc_s]
 355   remove lib [gcc]
 356   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.4.5]
 357   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5] ==> [/usr/lib/gcc/x86_64-redhat-linux/4.4.5]
 358   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../../../lib64] ==> [/usr/lib64]
 359   collapse dir [/lib/../lib64] ==> [/lib64]
 360   collapse dir [/usr/lib/../lib64] ==> [/usr/lib64]
 361   collapse dir [/usr/lib/gcc/x86_64-redhat-linux/4.4.5/../../..] ==> [/usr/lib]
 362   implicit libs: [gfortranbegin;gfortran;m;c]
 363   implicit dirs: [/usr/lib/gcc/x86_64-redhat-linux/4.4.5;/usr/lib64;/lib64;/usr/lib]
 364
 365
 366 Determining if the Fortran compiler supports Fortran 90 passed with the following output:
 367 Change Dir: /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp
 368
 369 Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
 370 /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/cmTryCompileExec.dir/build
 371 gmake[1]: Entering directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 372 /usr/bin/cmake -E cmake_progress_report /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/CMakeFiles 1
 373 Building Fortran object CMakeFiles/cmTryCompileExec.dir/testFortranCompilerF90.f90.o
 374 /usr/bin/gfortran  -o CMakeFiles/cmTryCompileExec.dir/testFortranCompilerF90.f90.o   -c /users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp/testFortranCompilerF90.f90
 375 Linking Fortran executable cmTryCompileExec
 376 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt --verbose=1
 377 /usr/bin/gfortran        CMakeFiles/cmTryCompileExec.dir/testFortranCompilerF90.f90.o  -o cmTryCompileExec -rdynamic
 378 gmake[1]: Leaving directory `/scheraga/users/adam/unres/source/unres/src_MD-M/CMakeFiles/CMakeTmp'
 379
 380