source/unres/src-HCD-5D/COMMON.CHAIN

   1       integer nres,nsup,nstart_sup,nz_start,nz_end,iz_sc,
   2      &  nres0,nstart_seq,nchain,chain_length,chain_border,iprzes,
   3      &  chain_border1,ireschain,tabpermchain,npermchain,nequiv,
   4      &  nchain_group,iequiv,mapchain,afmend,afmbeg,
   5      &  nres_chomo,nmodel_start,nran_start
   6       double precision c,dc,dc_old,d_c_work,xloc,xrot,dc_norm,t,r,
   7      & prod,rt,dc_work,cref,crefjlee,dc_norm2,velAFMconst,
   8      & totTafm,chomo
   9       character*256 pdbfiles_chomo(max_template)
  10       common /chain/ c(3,maxres2+2),dc(3,0:maxres2),dc_old(3,0:maxres2),
  11      & xloc(3,maxres),xrot(3,maxres),dc_norm(3,0:maxres2),
  12      & dc_norm2(3,0:maxres2),
  13      & dc_work(MAXRES6),nres,nres0,nran_start
  14       common /rotmat/ t(3,3,maxres),r(3,3,maxres),prod(3,3,maxres),
  15      &                rt(3,3,maxres)
  16       common /refstruct/ cref(3,maxres2+2),
  17      & crefjlee(3,maxres2+2),
  18      & nsup,nstart_sup,nstart_seq,iprzes,
  19      & chain_length(maxchain),npermchain,ireschain(maxres),
  20      & tabpermchain(maxchain,maxperm),nchain_group,
  21      &  iequiv(maxchain,maxres),nequiv(maxchain),mapchain(maxchain),
  22      & chain_border(2,maxchain),chain_border1(2,maxchain),nchain
  23       common /from_zscore/ nz_start,nz_end,iz_sc
  24       double precision boxxsize,boxysize,boxzsize,enecut,sscut,
  25      & sss,sssgrad,
  26      & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick,
  27      & tubecenter,tubeR0,
  28      & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick
  29       double precision forceAFMconst, distafminit
  30       common /box/  boxxsize,boxysize,boxzsize,enecut,sscut,sss,sssgrad,
  31      & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick
  32       common /afm/  forceAFMconst, distafminit,afmend,afmbeg,
  33      & velAFMconst,
  34      & totTafm
  35       common /tube/ tubecenter(3),tubeR0,
  36      & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick
  37       common /chomo_models/ chomo(3,maxres2+2,max_template),
  38      & nres_chomo(max_template),nmodel_start
  39       common /chomo_files/ pdbfiles_chomo