Fixed the addition of dummy chain ends to structures read from UNRES PDB files
authorAdam Liwo <jal47@matrix.chem.cornell.edu>
Sun, 17 Feb 2013 03:34:55 +0000 (22:34 -0500)
committerAdam Liwo <jal47@matrix.chem.cornell.edu>
Sun, 17 Feb 2013 04:04:41 +0000 (23:04 -0500)
commit34b56f82298df0d9781948908b2d93415838d88e
tree6699fcd78d2d0d028d1ef86e8989d978a637fc31
parent6faa406438bff5968dc4a386929745cfaf554352
Fixed the addition of dummy chain ends to structures read from UNRES PDB files
Fixed the bug in arcos.f (returned alpha=0 for cos(alpha)<=-1)

Conflicts:

bin/unres/MD/unres_ifort_MPICH_E0LL2Y.exe
source/unres/src_MD-M/Makefile
30 files changed:
bin/unres/CSA/unres_csa_ifort_mpich-1.2.7p1.exe
bin/unres/CSA/unres_dfa_csa-Yi.exe
bin/unres/MD/unres_Tc_procor_oldparm_em64-D-symetr.exe
bin/unres/MINIM/unres_ifort_MIN_single_E0LL2Y.exe
bin/wham/wham_ifort_MPICH_E0LL2Y-DEBUG.exe
source/unres/src_CSA/Makefile_GAB [new file with mode: 0644]
source/unres/src_CSA/arcos.f
source/unres/src_CSA/readpdb.F
source/unres/src_CSA/refsys.f [new file with mode: 0644]
source/unres/src_CSA_DiL/arcos.f
source/unres/src_CSA_DiL/readpdb.F
source/unres/src_MD-M/COMMON.REFSYS [deleted file]
source/unres/src_MD-M/Makefile
source/unres/src_MD-M/arcos.f
source/unres/src_MD-M/bond_move.f
source/unres/src_MD-M/readpdb.F
source/unres/src_MD-M/refsys.f
source/unres/src_MD/COMMON.REFSYS [deleted file]
source/unres/src_MD/arcos.f
source/unres/src_MD/bond_move.f
source/unres/src_MD/readpdb.F
source/unres/src_MD/refsys.f
source/unres/src_MIN/Makefile [new symlink]
source/unres/src_MIN/Makefile_ifort_single
source/unres/src_MIN/arcos.f
source/unres/src_MIN/readpdb.F
source/unres/src_MIN/refsys.f [new file with mode: 0644]
source/wham/src/enecalc1.F
source/wham/src/molread_zs.F
source/wham/src/readrtns.F