new lipid potentials

[unres.git] / source / unres / src_MD-M / parmread.F

diff --git a/source/unres/src_MD-M/parmread.F b/source/unres/src_MD-M/parmread.F
index 1244d5d..093ca8a 100644 (file)
--- a/source/unres/src_MD-M/parmread.F
+++ b/source/unres/src_MD-M/parmread.F
@@ -31,7 +31,7 @@ C
       character*1 toronelet(-2:2) /"p","a","G","A","P"/
       logical lprint,LaTeX
       dimension blower(3,3,maxlob)
-      dimension b(13)
+C      dimension b(13)
       character*3 lancuch,ucase
 C
 C For printing parameters after they are read set the following in the UNRES
@@ -916,7 +916,7 @@ C
 
       do i=0,nloctyp-1
         read (ifourier,*,end=115,err=115)
-        read (ifourier,*,end=115,err=115) (b(ii),ii=1,13)
+        read (ifourier,*,end=115,err=115) (b(ii,i),ii=1,13)
 #ifdef NEWCORR
         read (ifourier,*,end=115,err=115) (bnew1(ii,1,i),ii=1,3)
         read (ifourier,*,end=115,err=115) (bnew2(ii,1,i),ii=1,3)
@@ -926,7 +926,7 @@ C
 #endif 
         if (lprint) then
         write (iout,*) 'Type',i
-        write (iout,'(a,i2,a,f10.5)') ('b(',ii,')=',b(ii),ii=1,13)
+        write (iout,'(a,i2,a,f10.5)') ('b(',ii,')=',b(ii,i),ii=1,13)
         endif
 c        B1(1,i)  = b(3)
 c        B1(2,i)  = b(5)
@@ -947,65 +947,66 @@ c        B2(2,-i)  =-b(4)
 
 c        b2(1,i)=0.0d0
 c        b2(2,i)=0.0d0
-        CC(1,1,i)= b(7)
-        CC(2,2,i)=-b(7)
-        CC(2,1,i)= b(9)
-        CC(1,2,i)= b(9)
-        CC(1,1,-i)= b(7)
-        CC(2,2,-i)=-b(7)
-        CC(2,1,-i)=-b(9)
-        CC(1,2,-i)=-b(9)
+        CC(1,1,i)= b(7,i)
+        CC(2,2,i)=-b(7,i)
+        CC(2,1,i)= b(9,i)
+        CC(1,2,i)= b(9,i)
+        CC(1,1,-i)= b(7,i)
+        CC(2,2,-i)=-b(7,i)
+        CC(2,1,-i)=-b(9,i)
+        CC(1,2,-i)=-b(9,i)
 c        CC(1,1,i)=0.0d0
 c        CC(2,2,i)=0.0d0
 c        CC(2,1,i)=0.0d0
 c        CC(1,2,i)=0.0d0
-        Ctilde(1,1,i)=b(7)
-        Ctilde(1,2,i)=b(9)
-        Ctilde(2,1,i)=-b(9)
-        Ctilde(2,2,i)=b(7)
-        Ctilde(1,1,-i)=b(7)
-        Ctilde(1,2,-i)=-b(9)
-        Ctilde(2,1,-i)=b(9)
-        Ctilde(2,2,-i)=b(7)
+        Ctilde(1,1,i)=b(7,i)
+        Ctilde(1,2,i)=b(9,i)
+        Ctilde(2,1,i)=-b(9,i)
+        Ctilde(2,2,i)=b(7,i)
+        Ctilde(1,1,-i)=b(7,i)
+        Ctilde(1,2,-i)=-b(9,i)
+        Ctilde(2,1,-i)=b(9,i)
+        Ctilde(2,2,-i)=b(7,i)
 
 c        Ctilde(1,1,i)=0.0d0
 c        Ctilde(1,2,i)=0.0d0
 c        Ctilde(2,1,i)=0.0d0
 c        Ctilde(2,2,i)=0.0d0
-        DD(1,1,i)= b(6)
-        DD(2,2,i)=-b(6)
-        DD(2,1,i)= b(8)
-        DD(1,2,i)= b(8)
-        DD(1,1,-i)= b(6)
-        DD(2,2,-i)=-b(6)
-        DD(2,1,-i)=-b(8)
-        DD(1,2,-i)=-b(8)
+        DD(1,1,i)= b(6,i)
+        DD(2,2,i)=-b(6,i)
+        DD(2,1,i)= b(8,i)
+        DD(1,2,i)= b(8,i)
+        DD(1,1,-i)= b(6,i)
+        DD(2,2,-i)=-b(6,i)
+        DD(2,1,-i)=-b(8,i)
+        DD(1,2,-i)=-b(8,i)
 c        DD(1,1,i)=0.0d0
 c        DD(2,2,i)=0.0d0
 c        DD(2,1,i)=0.0d0
 c        DD(1,2,i)=0.0d0
-        Dtilde(1,1,i)=b(6)
-        Dtilde(1,2,i)=b(8)
-        Dtilde(2,1,i)=-b(8)
-        Dtilde(2,2,i)=b(6)
-        Dtilde(1,1,-i)=b(6)
-        Dtilde(1,2,-i)=-b(8)
-        Dtilde(2,1,-i)=b(8)
-        Dtilde(2,2,-i)=b(6)
+        Dtilde(1,1,i)=b(6,i)
+        Dtilde(1,2,i)=b(8,i)
+        Dtilde(2,1,i)=-b(8,i)
+        Dtilde(2,2,i)=b(6,i)
+        Dtilde(1,1,-i)=b(6,i)
+        Dtilde(1,2,-i)=-b(8,i)
+        Dtilde(2,1,-i)=b(8,i)
+        Dtilde(2,2,-i)=b(6,i)
 
 c        Dtilde(1,1,i)=0.0d0
 c        Dtilde(1,2,i)=0.0d0
 c        Dtilde(2,1,i)=0.0d0
 c        Dtilde(2,2,i)=0.0d0
-        EEold(1,1,i)= b(10)+b(11)
-        EEold(2,2,i)=-b(10)+b(11)
-        EEold(2,1,i)= b(12)-b(13)
-        EEold(1,2,i)= b(12)+b(13)
-        EEold(1,1,-i)= b(10)+b(11)
-        EEold(2,2,-i)=-b(10)+b(11)
-        EEold(2,1,-i)=-b(12)+b(13)
-        EEold(1,2,-i)=-b(12)-b(13)
+        EEold(1,1,i)= b(10,i)+b(11,i)
+        EEold(2,2,i)=-b(10,i)+b(11,i)
+        EEold(2,1,i)= b(12,i)-b(13,i)
+        EEold(1,2,i)= b(12,i)+b(13,i)
+        EEold(1,1,-i)= b(10,i)+b(11,i)
+        EEold(2,2,-i)=-b(10,i)+b(11,i)
+        EEold(2,1,-i)=-b(12,i)+b(13,i)
+        EEold(1,2,-i)=-b(12,i)-b(13,i)
         write(iout,*) "TU DOCHODZE"
+        print *,"JESTEM"
 c        ee(1,1,i)=1.0d0
 c        ee(2,2,i)=1.0d0
 c        ee(2,1,i)=0.0d0
@@ -1116,10 +1117,10 @@ C---------------------- GB or BP potential -----------------------------
 C now we start reading lipid
       do i=1,ntyp
        read (isidep,*,end=1161,err=1161)(epslip(i,j),j=i,ntyp)
-       print *,"WARNING!!"
-       do j=1,ntyp
-       epslip(i,j)=epslip(i,j)+0.5d0
-       enddo
+C       print *,"WARNING!!"
+C       do j=1,ntyp
+C       epslip(i,j)=epslip(i,j)+0.05d0
+C       enddo
       enddo
 C For the GB potential convert sigma'**2 into chi'
       if (ipot.eq.4) then
@@ -1159,6 +1160,7 @@ C Calculate the "working" parameters of SC interactions.
       do i=2,ntyp
         do j=1,i-1
          eps(i,j)=eps(j,i)
+          epslip(i,j)=epslip(j,i)
         enddo
       enddo
       do i=1,ntyp