AFM+tube+kcc

[unres.git] / source / unres / src_MD-M / COMMON.CHAIN

diff --git a/source/unres/src_MD-M/COMMON.CHAIN b/source/unres/src_MD-M/COMMON.CHAIN
index 914c402..372fa85 100644 (file)
--- a/source/unres/src_MD-M/COMMON.CHAIN
+++ b/source/unres/src_MD-M/COMMON.CHAIN
@@ -2,7 +2,8 @@
      &  nres0,nstart_seq,chain_length,iprzes,tabperm,nperm,afmend,
      &  afmbeg
       double precision c,dc,dc_old,d_c_work,xloc,xrot,dc_norm,t,r,
-     & prod,rt,dc_work,cref,crefjlee,chain_rep,dc_norm2,velAFMconst
+     & prod,rt,dc_work,cref,crefjlee,chain_rep,dc_norm2,velAFMconst,
+     & totTafm
       common /chain/ c(3,maxres2+2),dc(3,0:maxres2),dc_old(3,0:maxres2),
      & xloc(3,maxres),xrot(3,maxres),dc_norm(3,0:maxres2),
      & dc_norm2(3,0:maxres2),
@@ -17,8 +18,14 @@
       common /from_zscore/ nz_start,nz_end,iz_sc
       double precision boxxsize,boxysize,boxzsize,enecut,sscut,
      & sss,sssgrad,
-     & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick
+     & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick,
+     & tubecenter,tubeR0,
+     & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick     
       common /box/  boxxsize,boxysize,boxzsize,enecut,sscut,sss,sssgrad,
      & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick
-      common /afm/  forceAFMconst, distafminit,afmend,afmbeg,velAFMconst
+      common /afm/  forceAFMconst, distafminit,afmend,afmbeg,
+     & velAFMconst,
+     & totTafm
+      common /tube/ tubecenter(3),tubeR0,
+     & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick