+! This common block contains general variables controlling the calculations
+! and output level.
+!... energy_dec = .true. means print energy decomposition matrix
integer modecalc,iscode,indpdb,indback,indphi,iranconf,icheckgrad,
& inprint,i2ndstr,mucadyn,constr_dist,symetr,AFMlog,selfguide,
& shield_mode,tor_mode,tubelog,constr_homology,homol_nset,
- & nsaxs,saxs_mode,iprint
+ & iprint
+!... minim = .true. means DO minimization.
logical minim,refstr,pdbref,outpdb,outmol2,overlapsc,energy_dec,
- & mremd_dec,sideadd,lsecondary,read_cart,unres_pdb,
- & vdisulf,searchsc,lmuca,dccart,extconf,out1file,
+ & mremd_dec,sideadd,lsecondary,read_cart,unres_pdb,out_cart,
+ & out_int,vdisulf,searchsc,lmuca,dccart,extconf,out1file,gmatout,
& gnorm_check,gradout,split_ene,with_theta_constr,
& with_dihed_constr,read2sigma,start_from_model,read_homol_frag,
- & out_template_coord,out_template_restr
- real*8 Psaxs(maxsaxs),distsaxs(maxsaxs),CSAXS(3,maxsaxs),wsaxs0,
- & scal_rad, saxs_cutoff
- real*8 waga_homology
- real*8 waga_dist, waga_angle, waga_theta, waga_d, dist_cut,
- & dist2_cut
+ & out_template_coord,out_template_restr,usampl,loc_qlike,adaptive
double precision aincr
common /cntrl/ aincr,modecalc,iscode,indpdb,indback,indphi,
& iranconf,
& icheckgrad,minim,i2ndstr,refstr,pdbref,outpdb,outmol2,iprint,
& overlapsc,energy_dec,mremd_dec,sideadd,lsecondary,read_cart,
- & unres_pdb,vdisulf,searchsc,lmuca,dccart,mucadyn,extconf,out1file,
- & selfguide,AFMlog,shield_mode,tor_mode,tubelog,
- & constr_dist,gnorm_check,gradout,split_ene,with_theta_constr,
- & with_dihed_constr,symetr,
- & constr_homology,homol_nset,read2sigma,start_from_model,
+ & unres_pdb,out_cart,out_int,vdisulf,searchsc,lmuca,dccart,mucadyn,
+ & extconf,out1file,gmatout,selfguide,AFMlog,shield_mode,tor_mode,
+ & tubelog,constr_dist,gnorm_check,gradout,split_ene,
+ & with_theta_constr,with_dihed_constr,symetr,usampl,loc_qlike,
+ & adaptive,constr_homology,homol_nset,read2sigma,start_from_model,
& read_homol_frag,out_template_coord,out_template_restr
- common /homol/ waga_homology(maxprocs/20),
- & waga_dist, waga_angle, waga_theta, waga_d, dist_cut,dist2_cut
- common /saxsretr/Psaxs,distsaxs,csaxs,Wsaxs0,scal_rad,saxs_cutoff,
- & nsaxs,saxs_mode
-C... minim = .true. means DO minimization.
-C... energy_dec = .true. means print energy decomposition matrix