Merge branch 'prerelease-3.2.1' into czarek

[unres.git] / examples / unres / CSA / GAB / CSA / global / restrained / jpred_prediction / jp_fSt_H_1.als

diff --git a/examples/unres/CSA/GAB/CSA/global/restrained/jpred_prediction/jp_fSt_H_1.als b/examples/unres/CSA/GAB/CSA/global/restrained/jpred_prediction/jp_fSt_H_1.als
deleted file mode 100644 (file)
index b929afd..0000000
--- a/examples/unres/CSA/GAB/CSA/global/restrained/jpred_prediction/jp_fSt_H_1.als
+++ /dev/null
@@ -1,46 +0,0 @@
-SILENT_MODE
-BLOCK_FILE jp_fSt_H_1.concise.blc
-MAX_NSEQ 50
-MAX_INPUT_LEN 50
-OUTPUT_FILE jp_fSt_H_1.concise.ps
-PORTRAIT
-POINTSIZE 8
-IDENT_WIDTH 12
-X_OFFSET 2
-Y_OFFSET 2
-DEFINE_FONT 0 Helvetica                DEFAULT 
-DEFINE_FONT 1 Helvetica                REL             0.75   
-DEFINE_FONT 7 Helvetica                REL             0.6
-DEFINE_FONT 3 Helvetica-Bold   DEFAULT    
-DEFINE_FONT 4 Times-Bold       DEFAULT   
-DEFINE_FONT 5 Helvetica-BoldOblique    DEFAULT 
-#
-DEFINE_COLOUR 3  1 0.62 0.67   # Turquiose
-DEFINE_COLOUR 4  1 1 0         # Yellow
-DEFINE_COLOUR 5  1 0 0         # Red
-DEFINE_COLOUR 7  1 0 1         # Purple
-DEFINE_COLOUR 8  0 0 1         # Blue
-DEFINE_COLOUR 9  0 1 0         # Green
-DEFINE_COLOUR 10 0.41 0.64 1.00        # Pale blue 
-DEFINE_COLOUR 11 0.41 0.82 0.67        # Pale green 
-DEFINE_COLOUR 50 0.69 0.18 0.37        # Pink (helix)
-DEFINE_COLOUR 51 1.00 0.89 0.00        # Gold (strand)
-NUMBER_INT 10
-SETUP
-#
-# Highlight specific residues.
-# Avoid highlighting Lupas 'C' predictions by
-# limiting the highlighting to the alignments 
-Scol_CHARS     C 1 1 20 4   4
-Ccol_CHARS     H ALL    5
-Ccol_CHARS     P ALL    8
-SURROUND_CHARS LIV   ALL
-#
-# Replace known structure types with whitespace
-SUB_CHARS 1 5 20 13 H SPACE
-SUB_CHARS 1 5 20 13 E SPACE
-SUB_CHARS 1 5 20 13 - SPACE
-HELIX 3 8 8
-COLOUR_TEXT_REGION 3 8 8 8 50
-HELIX 3 13 8
-COLOUR_TEXT_REGION 3 13 8 13 50