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Merge branch 'homology' of mmka.chem.univ.gda.pl:unres into homology
[unres.git]
/
source
/
2015-09-30
Cezary Czaplewski
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-09-30
Cezary Czaplewski
cutoff for dfa beta formation to speed up calculations
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commitdiff
2015-09-15
Adam Liwo
Added newly created cluster exe and makefile
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commitdiff
2015-08-11
Adam Liwo
Minor change in unres-cluster DIMENSIONS
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commitdiff
2015-08-11
Adam Liwo
Cluster/unres modified to read MD coordinates in CX...
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commitdiff
2015-08-01
Adam Liwo
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-08-01
Cezary Czaplewski
read2sigma - now without this option code works as...
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commitdiff
2015-07-31
Adam Liwo
pulled readrtns
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commitdiff
2015-07-31
Cezary Czaplewski
restoring read2sigma code after wrong merge
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commitdiff
2015-07-31
Cezary Czaplewski
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
tree
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commitdiff
2015-07-31
Cezary Czaplewski
new format of read2sigma *sco files (res number in...
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commitdiff
2015-07-31
Adam Liwo
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-07-31
Adam Liwo
By AL: fixed FGPROCS>1 problem in HMREMD; iset passed...
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commitdiff
2015-07-28
Cezary Czaplewski
bugfix for read2sigma with different domain definition...
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commitdiff
2015-07-21
Cezary Czaplewski
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-07-21
Cezary Czaplewski
read2sigma supports separate domain definition in...
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commitdiff
2015-07-18
Adam Liwo
Added putting secondary-structure information to the...
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commitdiff
2015-07-17
Adam Liwo
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
tree
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commitdiff
2015-07-17
Adam Liwo
Added Makefiles
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commitdiff
2015-07-17
Cezary Czaplewski
the first version of READ2SIGMA - the same domains...
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commitdiff
2015-07-09
Adam Liwo
Fixed the "***" issue in PDB output format by shifting...
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commitdiff
2015-06-28
Adam Liwo
Fixes to compile WHAM and CLUSTER on AIX (nostromo...
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commitdiff
2015-06-17
Adam Liwo
Added ifdefs to include/exlucde DFA becuase of the...
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commitdiff
2015-06-12
Adam Liwo
Fixed the homology gradient in finegrain mode
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commitdiff
2015-06-07
Adam Liwo
Added an option to compile unres, wham, and cluster...
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commitdiff
2015-06-07
Adam Liwo
Fixes made in connection to Hamiltonian replica exchang...
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commitdiff
2015-05-28
Adam Liwo
Fixed main module of WHAM
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commitdiff
2015-05-14
Adam Liwo
Fixed the following components:
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commitdiff
2015-05-13
Adam Liwo
Fixed a MAJOR error in WHAM; energies were computed...
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commitdiff
2015-05-07
Cezary Czaplewski
cmake compilation for cluster and wham repaired
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commitdiff
2015-05-06
Cezary Czaplewski
minimization in int works with FGPROCS>1
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commitdiff
2015-04-16
Felipe Pineda
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-04-16
Felipe Pineda
WHAM and CLUSTER with HM restraints by AL and FP
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commitdiff
2015-03-17
Cezary Czaplewski
remd with homol_nset>1 working with FG parallelization
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commitdiff
2015-03-13
Cezary Czaplewski
changes to avoid PMPI_Scatterv: Invalid buffer pointer...
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commitdiff
2015-03-06
Felipe Pineda
Lorentzian-type distance restraint energy implemented
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commitdiff
2015-03-04
Felipe Pineda
common.control cleaning
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commitdiff
2015-03-04
Felipe Pineda
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-03-04
Felipe Pineda
After final fix by AL
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commitdiff
2015-03-03
Cezary Czaplewski
REMD with HOMOL_NSET>1 and single weight for all homolo...
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commitdiff
2015-02-25
Felipe Pineda
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-02-25
Felipe Pineda
Merge branch 'master' of mmka.chem.univ.gda.pl:unres...
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commitdiff
2015-02-25
Cezary Czaplewski
respa now working without dfa weights
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commitdiff
2015-02-20
Felipe Pineda
Merge branch 'homology' of mmka.chem.univ.gda.pl:unres...
tree
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commitdiff
2015-02-19
Adam Sieradzan
EBE change in prerealese-3.2.1 make dummy atom idependent
tree
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commitdiff
2015-02-16
Adam Sieradzan
poprawka w src_MD
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commitdiff
2015-02-16
Adam Sieradzan
Poprawiony src_MD-M gradient
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commitdiff
2015-02-12
Felipe Pineda
1st running version of UNRES HM by FP and AL
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commitdiff
2015-02-11
Adam Sieradzan
Merge branch 'prerelease-3.2.1' of mmka:unres into...
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commitdiff
2015-02-11
Adam Sieradzan
rozgrzebana minimalizacja
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commitdiff
2015-02-11
Adam Sieradzan
intro of SCCOR into src_MIN
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commitdiff
2015-01-24
Adam Liwo
Corrected refsys.f in src_MD-M
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commitdiff
2015-01-23
Adam Liwo
refsys
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commitdiff
2015-01-23
Adam Liwo
Merge branch 'prerelease-3.2.1' of mmka.chem.univ.gda...
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commitdiff
2015-01-23
Adam Liwo
Corrected refsys.f in src_MD-M
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commitdiff
2015-01-22
Adam Sieradzan
Merge branch 'prerelease-3.2.1' of mmka:unres into...
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commitdiff
2015-01-19
Adam Sieradzan
dzialajacy wham+poprawka w funckji energi+ poprawka...
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commitdiff
2015-01-08
Cezary Czaplewski
dfa.F was missing form cmake configurations files
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commitdiff
2015-01-08
Cezary Czaplewski
Makefiles for mpich2 and some corrections to Makefiles
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commitdiff
2015-01-05
Adam Liwo
Merge branch 'prerelease-3.2.1' of mmka.chem.univ.gda...
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commitdiff
2015-01-05
Adam Liwo
Added cinfo
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commitdiff
2015-01-05
Adam Liwo
MREMD corrected; Langevin mode (bcast instead of scatte...
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commitdiff
2015-01-04
Adam Sieradzan
poprawka gradientu w CSA
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commitdiff
2015-01-04
Adam Sieradzan
Naprawienie wham'a oraz wprowadzenie SCcorr do CSA
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commitdiff
2014-12-30
Adam Sieradzan
wprowadzenie do multichaina SCcorr
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commitdiff
2014-12-19
Adam Sieradzan
debug w poszukiwaniu bledu w ostatniej reszcie
tree
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commitdiff
2014-12-18
Adam Kazimierz Sie...
dodanie czytania wagi wsccor do clustrowania-M
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commitdiff
2014-12-18
Adam Kazimierz Sie...
Wstawnieni SCCOR dla clustrowania. Nie wiadomo czy...
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commitdiff
2014-12-18
Adam Kazimierz Sie...
Wprowadzenie SCCOR dla wham-M
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commitdiff
2014-12-18
Adam Kazimierz Sie...
Rozgrzebany SCCOR dla wham-M
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commitdiff
2014-12-17
Adam Kazimierz Sie...
Poprawiony SCR_MD-M i dzialajacy
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commitdiff
2014-12-17
Adam Kazimierz Sie...
Wprowadznie potencjalow SC-COR do multichain oraz ich...
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commitdiff
2014-12-11
Adam Liwo
Updated changelog, added minimization-only version...
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commitdiff
2014-12-11
Adam Liwo
Created binaries and fixed bugs when compiling single...
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commitdiff
2014-12-05
Cezary Czaplewski
new options for mpich2 with gfortran Makefile
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commitdiff
2014-12-05
Cezary Czaplewski
src_CSA_DiL removed from prerelease, current version...
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commitdiff
2014-11-28
Cezary Czaplewski
testing 2D replica exchange with FPROCS>1
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commitdiff
2014-11-28
Dawid Jagiela
changed FF preprocesor flags in src_CSA_DiL/CMakeLists.txt
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commitdiff
2014-11-28
Dawid Jagiela
fixed FF preprocesor flags for src_CSA/CMakeLists.txt
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commitdiff
2014-11-28
Dawid Jagiela
changed csa.f to csa.F in src_CSA/CMakeLists.txt sources
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commitdiff
2014-11-28
Adam Liwo
Trying to bring files - continued
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commitdiff
2014-11-27
Adam Liwo
Fixed Makefiles, handle all force fields thru appropria...
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commitdiff
2014-11-09
Cezary Czaplewski
restart is now working with HOMOL_NSET
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commitdiff
2014-11-07
Cezary Czaplewski
untrack *.exe in git
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commitdiff
2014-11-07
Cezary Czaplewski
some corrections to 2D replica exchange with homology
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commitdiff
2014-11-07
Cezary Czaplewski
2D replica exchange with homology constraints
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commitdiff
2014-11-05
Dawid Jagiela
ctest ala10 binary location fix
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commitdiff
2014-10-27
Dawid Jagiela
1) binaries are compiled into /bin subdirectory of...
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commitdiff
2014-10-26
Dawid Jagiela
1) Threading cleanup in src_CSA & src_CSA_DiL
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commitdiff
2014-10-26
Dawid Jagiela
switched to CMake FindMPI module in all source files...
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commitdiff
2014-10-26
Dawid Jagiela
added missing preprocessor flags for prng_32.F
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commitdiff
2014-10-25
Dawid Jagiela
prng.f unification
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commitdiff
2014-10-17
Felipe Pineda
Adam's homology version of unres with new readpdb.F...
tree
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commitdiff
2014-10-16
Dawid Jagiela
64-bit fix for unres/CSA and unres/CSA_DiL code
tree
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commitdiff
2014-10-14
Dawid Jagieła
Merge branch 'prerelease-3.2.1' of mmka:unres into...
tree
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commitdiff
2014-10-14
Dawid Jagieła
fixed CMake variable typo
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commitdiff
2014-10-08
Cezary Czaplewski
correct default option for compilers in cluster CmakeLi...
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commitdiff
2014-10-08
Cezary Czaplewski
correct default option for compilers in wham CmakeList.txt
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commitdiff
2013-11-05
Adam Sieradzan
Debug part 1
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commitdiff
2013-10-07
Adam Sieradzan
small correctian in wham
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commitdiff
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