integer modecalc,iscode,indpdb,indback,indphi,iranconf,icheckgrad,
& iprint,i2ndstr,mucadyn,constr_dist,constr_homology,homol_nset
real*8 waga_homology
- real*8 waga_dist, waga_angle, waga_theta, waga_d, dist_cut
+ real*8 waga_dist, waga_angle, waga_theta, waga_d, dist_cut,
+ & dist2_cut
logical minim,refstr,pdbref,outpdb,outmol2,outx,overlapsc,
& energy_dec,
& sideadd,lsecondary,read_cart,unres_pdb,
& constr_dist,gnorm_check,gradout,split_ene,constr_homology,
& homol_nset,read2sigma,start_from_model
common /homol/ waga_homology(maxprocs/20),
- & waga_dist, waga_angle, waga_theta, waga_d, dist_cut
+ & waga_dist, waga_angle, waga_theta, waga_d, dist_cut,dist2_cut
C... minim = .true. means DO minimization.
C... energy_dec = .true. means print energy decomposition matrix