1 ********************************************************************************
2 * Settings for the program of united-residue peptide simulation in real space *
4 * ------- As of 6/23/01 ----------- *
6 ********************************************************************************
7 c implicit real*8 (a-h,o-z)
8 C Max. number of processors.
9 c parameter (maxprocs=128)
10 C Max. number of fine-grain processors
11 c parameter (max_fg_procs=maxprocs)
12 C Max. number of coarse-grain processors
13 c parameter (max_cg_procs=maxprocs)
14 C Max. number of AA residues
16 c parameter (maxres=250)
17 parameter (maxres=1200)
18 c parameter (maxres=3300)
19 C Appr. max. number of interaction sites
21 parameter (maxres2=2*maxres)
22 c Max. number of chains
24 parameter (maxchain=6)
25 C Max number of symetries
26 integer maxsym,maxperm
27 parameter (maxsym=maxchain,maxperm=720)
28 C Max. number of variables
30 parameter (maxvar=4*maxres)
31 C Max. number of groups of interactions that a given SC is involved in
33 parameter (maxint_gr=2)
34 C Max. number of derivatives of virtual-bond and side-chain vectors in theta
37 parameter (maxdim=(maxres-1)*(maxres-2)/2)
38 c parameter (maxdim=10000)
39 C Max. number of SC contacts
41 parameter (maxcont=12*maxres)
42 C Max. number of contacts per residue
44 parameter (maxconts=maxres)
45 C Number of AA types (at present only natural AA's will be handled
47 parameter (ntyp=24,ntyp1=ntyp+1)
49 parameter (nntyp=ntyp*(ntyp+1)/2)
50 C Max. number of types of dihedral angles & multiplicity of torsional barriers
51 C and the number of terms in double torsionals
52 integer maxtor,maxterm,maxlor,maxtermd_1,maxtermd_2,maxtor_kcc,
54 parameter (maxtor=4,maxterm=10,maxlor=3,maxtermd_1=8,maxtermd_2=8)
55 parameter (maxtor_kcc=6,maxval_kcc=6)
56 c Max number of new valence-angle (only) terms
58 parameter (maxang_kcc=36)
59 c Max number of torsional terms in SCCOR
61 parameter (maxterm_sccor=6)
62 C Max. number of residue types and parameters in expressions for
63 C virtual-bond angle bending potentials
64 integer maxthetyp,maxthetyp1,maxtheterm,maxtheterm2,maxtheterm3,
65 & maxsingle,maxdouble,mmaxtheterm
66 parameter (maxthetyp=3,maxthetyp1=maxthetyp+1,maxtheterm=20,
67 & maxtheterm2=6,maxtheterm3=4,maxsingle=6,maxdouble=4,
68 & mmaxtheterm=maxtheterm)
69 C Max. number of lobes in SC distribution
72 C Max. number of S-S bridges
75 C Max. number of dihedral angle constraints
77 parameter (maxdih_constr=maxres)
78 C Max. number of patterns in the pattern database
80 parameter (maxseq=1000)
81 C Max. number of residues in a peptide in the database
83 parameter (maxres_base=1000)
84 C Max. number of threading attempts
86 parameter (maxthread=2000)
87 C Max. number of move types in MCM
89 parameter (maxmovetype=4)
90 C Max. number of stored confs. in MC/MCM simulation
92 parameter (maxsave=2000)
93 C Max. number of conformations in Master's cache array
95 parameter (max_cache=1000)
96 C Max. number of conformations in the pool
98 parameter (max_pool=1000)
99 C Number of threads in deformation
100 integer max_thread,max_thread2
101 parameter (max_thread=40,max_thread2=2*max_thread)
102 C Number of steps in DSM
104 parameter (max_step=1)
105 C Number of structures to compare at t=0
106 integer max_threadss,max_threadss2
107 parameter (max_threadss=80,max_threadss2=2*max_threadss)
108 C Maxmimum number of angles per residue
111 C Maximum number of groups of angles
113 parameter (mxgr=2*maxres)
114 C Maximum number of chains
117 C Maximum number of generated conformations
119 parameter (mxio=1000)
120 C Maximum number of seed
122 parameter (max_seed=100)
123 C Maximum number of structures for ZSCORE for each protein
126 C Maximum number of structures stored for comparison for ZSCORE for each protein
129 C Maximum number of proteins for ZSCORE
131 parameter (maxprotzs=1)
132 C Maximum number of conf in rmsdbank
134 parameter (maxrmsdb=110)
135 C Maximum number of bankt conformations
137 parameter (mxiot=mxio)
138 c Maximum number of conformations in MCMF
140 parameter (maxstr_mcmf=800)
141 c Maximum number of families in MCMF
143 parameter (maxfam_p=20)
144 c Maximum number of structures in family in MCMF
146 parameter (maxstr_fam=40)
147 C Maximum number of threads in MCMF
148 integer maxthread_mcmf
149 parameter (maxthread_mcmf=10)
150 C Maximum number of SC local term fitting function coefficiants
152 parameter (maxsccoef=65)
153 C Maximum number of terms in SC bond-stretching potential
155 parameter (maxbondterm=3)
156 C Maximum number of bins in SAXS restraints
158 parameter (MaxSAXS=1000)