1 ********************************************************************************
2 * Settings for the program of united-residue peptide simulation in real space *
4 * ------- As of 6/23/01 ----------- *
6 ********************************************************************************
7 C Max. number of processors.
9 parameter (maxprocs=2048)
10 C Max. number of fine-grain processors
12 parameter (max_fg_procs=maxprocs)
13 C Max. number of coarse-grain processors
15 parameter (max_cg_procs=maxprocs)
16 C Max. number of AA residues
18 parameter (maxres=800)
19 C Appr. max. number of interaction sites
20 integer maxres2,maxres6,mmaxres2
21 parameter (maxres2=2*maxres,maxres6=6*maxres)
22 parameter (mmaxres2=(maxres2*(maxres2+1)/2))
23 C Max. number of variables
25 parameter (maxvar=6*maxres)
26 C Max. number of groups of interactions that a given SC is involved in
28 parameter (maxint_gr=2)
29 C Max. number of derivatives of virtual-bond and side-chain vectors in theta
32 parameter (maxdim=(maxres-1)*(maxres-2)/2)
33 C Max. number of SC contacts
35 parameter (maxcont=12*maxres)
36 C Max. number of contacts per residue
38 parameter (maxconts=maxres/4)
39 c parameter (maxconts=50)
40 C Number of AA types (at present only natural AA's will be handled
42 parameter (ntyp=20,ntyp1=ntyp+1)
43 C Max. number of types of dihedral angles & multiplicity of torsional barriers
44 C and the number of terms in double torsionals
45 integer maxtor,maxterm,maxlor,maxtermd_1,maxtermd_2
46 parameter (maxtor=4,maxterm=10,maxlor=3,maxtermd_1=8,maxtermd_2=8)
47 C Max. number of residue types and parameters in expressions for
48 C virtual-bond angle bending potentials
49 integer maxthetyp,maxthetyp1,maxtheterm,maxtheterm2,maxtheterm3,
50 & maxsingle,maxdouble,mmaxtheterm
51 parameter (maxthetyp=3,maxthetyp1=maxthetyp+1,maxtheterm=20,
52 & maxtheterm2=6,maxtheterm3=4,maxsingle=6,maxdouble=4,
53 & mmaxtheterm=maxtheterm)
54 c Max number of torsional terms in SCCOR
56 parameter (maxterm_sccor=3)
57 C Max. number of lobes in SC distribution
60 C Max. number of S-S bridges
63 C Max. number of dihedral angle constraints
65 parameter (maxdih_constr=maxres)
66 C Max. number of patterns in the pattern database
69 C Max. number of residues in a peptide in the database
71 parameter (maxres_base=10)
72 C Max. number of threading attempts
74 parameter (maxthread=20)
75 C Max. number of move types in MCM
77 parameter (maxmovetype=4)
78 C Max. number of stored confs. in MC/MCM simulation
80 parameter (maxsave=20)
81 C Max. number of energy intervals
83 parameter (max_ene=10)
84 C Max. number of conformations in Master's cache array
86 parameter (max_cache=10)
87 C Max. number of conformations in the pool
89 parameter (max_pool=10)
90 C Number of energy components
92 parameter (n_ene=21,n_ene2=2*n_ene)
93 C Number of threads in deformation
94 integer max_thread,max_thread2
95 parameter (max_thread=4,max_thread2=2*max_thread)
96 C Number of structures to compare at t=0
97 integer max_threadss,max_threadss2
98 parameter (max_threadss=8,max_threadss2=2*max_threadss)
99 C Maxmimum number of angles per residue
102 C Maximum number of groups of angles
104 parameter (mxgr=2*maxres)
105 C Maximum number of chains
108 C Maximum number of generated conformations
111 C Maximum number of n7 generated conformations
114 C Maximum number of moves (n1-n8)
117 C Maximum number of seed
119 parameter (max_seed=1)
120 C Maximum number of timesteps for which stochastic MD matrices can be stored
121 integer maxflag_stoch
122 parameter (maxflag_stoch=0)
123 C Maximum number of backbone fragments in restraining
125 parameter (maxfrag_back=4)
126 C Maximum number of SC local term fitting function coefficiants
128 parameter (maxsccoef=65)
129 C Maximum number of terms in SC bond-stretching potential
131 parameter (maxbondterm=3)
132 C Maximum number of conformation stored in cache on each CPU before sending
133 C to master; depends on nstex / ntwx ratio
134 integer max_cache_traj
135 parameter (max_cache_traj=10)