1 ********************************************************************************
2 * Settings for the program of united-residue peptide simulation in real space *
4 * ------- As of 6/23/01 ----------- *
6 ********************************************************************************
7 C Max. number of processors.
9 parameter (maxprocs=1028)
10 C Max. number of fine-grain processors
12 c parameter (max_fg_procs=maxprocs)
13 parameter (max_fg_procs=256)
14 C Max. number of coarse-grain processors
16 parameter (max_cg_procs=maxprocs)
17 C Max. number of AA residues
19 parameter (maxres=600)
20 C Appr. max. number of interaction sites
21 integer maxres2,maxres6,mmaxres2
22 parameter (maxres2=2*maxres,maxres6=6*maxres)
23 parameter (mmaxres2=(maxres2*(maxres2+1)/2))
24 C Max number of symetric chains
28 parameter (maxperm=120)
29 C Max. number of variables
31 parameter (maxvar=6*maxres)
32 C Max. number of groups of interactions that a given SC is involved in
34 parameter (maxint_gr=2)
35 C Max. number of derivatives of virtual-bond and side-chain vectors in theta
38 parameter (maxdim=(maxres-1)*(maxres-2)/2)
39 C Max. number of SC contacts
41 parameter (maxcont=12*maxres)
42 C Max. number of contacts per residue
44 parameter (maxconts=maxres)
45 c parameter (maxconts=50)
46 C Number of AA types (at present only natural AA's will be handled
48 parameter (ntyp=24,ntyp1=ntyp+1)
49 C Max. number of types of dihedral angles & multiplicity of torsional barriers
50 C and the number of terms in double torsionals
51 integer maxtor,maxterm,maxlor,maxtermd_1,maxtermd_2,maxtermkcc
52 parameter (maxtor=4,maxterm=10,maxlor=3,maxtermd_1=8,maxtermd_2=8)
53 parameter (maxtermkcc=40)
54 C Max. number of residue types and parameters in expressions for
55 C virtual-bond angle bending potentials
56 integer maxthetyp,maxthetyp1,maxtheterm,maxtheterm2,maxtheterm3,
57 & maxsingle,maxdouble,mmaxtheterm
58 parameter (maxthetyp=3,maxthetyp1=maxthetyp+1,maxtheterm=20,
59 & maxtheterm2=6,maxtheterm3=4,maxsingle=6,maxdouble=4,
60 & mmaxtheterm=maxtheterm)
61 c Max number of torsional terms in SCCOR
63 parameter (maxterm_sccor=6)
64 C Max. number of lobes in SC distribution
67 C Max. number of S-S bridges
70 C Max. number of dihedral angle constraints
72 parameter (maxdih_constr=maxres)
73 C Max. number of patterns in the pattern database
76 C Max. number of residues in a peptide in the database
78 parameter (maxres_base=10)
79 C Max. number of threading attempts
81 parameter (maxthread=20)
82 C Max. number of move types in MCM
84 parameter (maxmovetype=4)
85 C Max. number of stored confs. in MC/MCM simulation
87 parameter (maxsave=20)
88 C Max. number of energy intervals
90 parameter (max_ene=10)
91 C Max. number of conformations in Master's cache array
93 parameter (max_cache=10)
94 C Max. number of conformations in the pool
96 parameter (max_pool=10)
97 C Number of energy components
99 parameter (n_ene=25,n_ene2=2*n_ene)
100 C Number of threads in deformation
101 integer max_thread,max_thread2
102 parameter (max_thread=4,max_thread2=2*max_thread)
103 C Number of structures to compare at t=0
104 integer max_threadss,max_threadss2
105 parameter (max_threadss=8,max_threadss2=2*max_threadss)
106 C Maxmimum number of angles per residue
109 C Maximum number of groups of angles
111 parameter (mxgr=2*maxres)
112 C Maximum number of chains
115 C Maximum number of generated conformations
118 C Maximum number of n7 generated conformations
121 C Maximum number of moves (n1-n8)
124 C Maximum number of seed
126 parameter (max_seed=1)
127 C Maximum number of timesteps for which stochastic MD matrices can be stored
128 integer maxflag_stoch
129 parameter (maxflag_stoch=0)
130 C Maximum number of backbone fragments in restraining
132 parameter (maxfrag_back=4)
133 C Maximum number of SC local term fitting function coefficiants
135 parameter (maxsccoef=65)
136 C Maximum number of terms in SC bond-stretching potential
138 parameter (maxbondterm=3)
139 C Maximum number of conformation stored in cache on each CPU before sending
140 C to master; depends on nstex / ntwx ratio
141 integer max_cache_traj
142 parameter (max_cache_traj=10)