3 jp_fSt_H_1.align PSIBLAST alignment with gaps and redundancy removed in FASTA format
4 jp_fSt_H_1.als Alscript command file. Used to generate PS/PDF outputjp_fSt_H_1.blast.gz PSIBLAST output (compressed)
5 jp_fSt_H_1.coils.csv The output from coils in CSV format
6 jp_fSt_H_1.coilseq.lupas_14 The output from coils using a window length of 14
7 jp_fSt_H_1.coilseq.lupas_21 The output from coils using a window length of 21
8 jp_fSt_H_1.coilseq.lupas_28 The output from coils using a window length of 28
9 jp_fSt_H_1.concise The prediction in pseudo-CSV format, including the coiled-coil prediction, solvent accessiblity and the sequence alignment
10 jp_fSt_H_1.concise.blc A BLC file of the prediction and alignment
11 jp_fSt_H_1.concise.pdf A PDF file of the prediction and alignment
12 jp_fSt_H_1.concise.ps A PostScript file of the prediction and alignment
13 jp_fSt_H_1.fasta Input query sequence in FASTA format
14 jp_fSt_H_1.hmm The HHMer2 profile of the alignment
15 jp_fSt_H_1.html A HTML file of the prediction and alignment
16 jp_fSt_H_1.jalview A Jalview annotation file to be read in with the .align file to view the predictions in Jalview
17 jp_fSt_H_1.jnet The output from Jnet
18 jp_fSt_H_1.profile PSIBLAST profile
19 jp_fSt_H_1.seq Your sequence
20 jp_fSt_H_1.simple.html The brief HTML output of the query sequence and prediction only