CTEST_FULL_OUTPUT
--------------------------------------------------------------------------
WARNING: Linux kernel CMA support was requested via the
btl_vader_single_copy_mechanism MCA variable, but CMA support is
not available due to restrictive ptrace settings.
The vader shared memory BTL will fall back on another single-copy
mechanism if one is available. This may result in lower performance.
Local host: dell15
--------------------------------------------------------------------------
indpdb= 0 pdbref= T
22
21 14 5 8 4 13 7 5 19 16 10 10 20 12 12 10 18 20 20 20
indpdb= 0 pdbref= T
22
21 14 5 8 4 13 7 5 19 16 10 10 20 12 12 10 18 20 20 20
12 21
12 21
Call Read_Bridge.
Call Read_Bridge.
ns= 0
ns= 0
NNT= 1 NCT= 22
NNT= 1 NCT= 22
MAIN: nnt= 2 nct= 21
MAIN: nnt= 2 nct= 21
Calculating RMS i= 100
Calculating RMS i= 200
Calculating RMS i= 100
Calculating RMS i= 200
End of distance computation
End of distance computation
Warning: ieee_invalid is signaling
Warning: ieee_divide_by_zero is signaling
Warning: ieee_inexact is signaling
********** Program terminated normally.
Warning: ieee_invalid is signaling
Warning: ieee_divide_by_zero is signaling
Warning: ieee_inexact is signaling
********** Program terminated normally.
[dell15:108958] 1 more process has sent help message help-btl-vader.txt / cma-permission-denied
[dell15:108958] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
THERE ARE 5 FAMILIES OF CONFORMATIONS
1L2Y_wham_T280K_0001.pdb:REMARK CLUSTER 1 FREE ENERGY 2.82417E+00 AVE RMSD 2.85
1L2Y_wham_T280K_0001.pdb:REMARK 1L2Y clustering ENERGY 4.01680E+00 RMS 3.06
1L2Y_wham_T280K_0002.pdb:REMARK CLUSTER 2 FREE ENERGY 2.90671E+00 AVE RMSD 2.84
1L2Y_wham_T280K_0002.pdb:REMARK 1L2Y clustering ENERGY 3.41173E+00 RMS 3.13
1L2Y_wham_T280K_0003.pdb:REMARK CLUSTER 3 FREE ENERGY 3.74178E+00 AVE RMSD 5.10
1L2Y_wham_T280K_0003.pdb:REMARK 1L2Y clustering ENERGY 4.14193E+00 RMS 4.91
1L2Y_wham_T280K_0004.pdb:REMARK CLUSTER 4 FREE ENERGY 4.39532E+00 AVE RMSD 2.95
1L2Y_wham_T280K_0004.pdb:REMARK 1L2Y clustering ENERGY 5.21552E+00 RMS 2.91
1L2Y_wham_T280K_0005.pdb:REMARK CLUSTER 5 FREE ENERGY 4.52293E+00 AVE RMSD 4.82
1L2Y_wham_T280K_0005.pdb:REMARK 1L2Y clustering ENERGY 5.22072E+00 RMS 6.63
0.62s
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