Execution Time6.31s

Test: UNRES_M_multi_ene (Failed)
Build: homology Linux-pgi-MPI E0LL2Y (dell15) on 2024-04-30 04:27:39
Repository revision: e5301131661f6c05ad36e8aceadd77d37334772a

Exit Value1

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Test output
CTEST_FULL_OUTPUT
--------------------------------------------------------------------------
WARNING: Linux kernel CMA support was requested via the
btl_vader_single_copy_mechanism MCA variable, but CMA support is
not available due to restrictive ptrace settings.

The vader shared memory BTL will fall back on another single-copy
mechanism if one is available. This may result in lower performance.

  Local host: dell15
--------------------------------------------------------------------------
[dell15:178348] *** Process received signal ***
[dell15:178348] Signal: Segmentation fault (11)
[dell15:178348] Signal code: Address not mapped (1)
[dell15:178348] Failing at address: 0xffffffff9939e2cc
[dell15:178348] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x10330)[0x2b68c5c2b330]
[dell15:178348] [ 1] /tmp/cdash/homology/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x41d6b3]
[dell15:178348] [ 2] /tmp/cdash/homology/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x50ed7d]
[dell15:178348] [ 3] /tmp/cdash/homology/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x50e4ae]
[dell15:178348] [ 4] /tmp/cdash/homology/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x404133]
[dell15:178348] [ 5] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5)[0x2b68c6ad6f45]
[dell15:178348] [ 6] /tmp/cdash/homology/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x404039]
[dell15:178348] *** End of error message ***
[dell15:178343] 1 more process has sent help message help-btl-vader.txt / cma-permission-denied
[dell15:178343] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
--------------------------------------------------------------------------
Primary job  terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 0 on node dell15 exited on signal 11 (Segmentation fault).
--------------------------------------------------------------------------
 MPI: node=             0  iseed=                  -3059742
 indpdb=           23  pdbref=  T
 ns=            0
 Call Read_Bridge.
 ns=            0
 dc    65.91700000000000     
 dc    65.91700000000000         122.6835000000000      
    48.08350000000000     
 after etotal
(standard_in) 1: syntax error
(standard_in) 1: syntax error
./prota_unres_energy_check_mult.sh: line 311: [: -eq: unary operator expected
(standard_in) 1: syntax error
./prota_unres_energy_check_mult.sh: line 318: [: -eq: unary operator expected
WARNING: energy is somewhat different , ene=