Friday, November 01 2024 02:30:31
UNRES
29.49s
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CTEST_FULL_OUTPUT
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WARNING: Linux kernel CMA support was requested via the
btl_vader_single_copy_mechanism MCA variable, but CMA support is
not available due to restrictive ptrace settings.
The vader shared memory BTL will fall back on another single-copy
mechanism if one is available. This may result in lower performance.
Local host: dell15
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[dell15:15210] *** Process received signal ***
[dell15:15210] Signal: Segmentation fault (11)
[dell15:15210] Signal code: Address not mapped (1)
[dell15:15210] Failing at address: 0x1a7b8461c
[dell15:15210] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x10330)[0x2b935e3bb330]
[dell15:15210] [ 1] /tmp/cdash/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x418de3]
[dell15:15210] [ 2] /tmp/cdash/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x4de5e7]
[dell15:15210] [ 3] /tmp/cdash/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x4ddfeb]
[dell15:15210] [ 4] /tmp/cdash/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x403ef3]
[dell15:15210] [ 5] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf5)[0x2b935f266f45]
[dell15:15210] [ 6] /tmp/cdash/build/bin/unresMD-mult_pgf90_MPI_E0LL2Y.exe[0x403df9]
[dell15:15210] *** End of error message ***
[dell15:15175] 1 more process has sent help message help-btl-vader.txt / cma-permission-denied
[dell15:15175] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
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Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
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mpirun noticed that process rank 0 with PID 0 on node dell15 exited on signal 11 (Segmentation fault).
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thetname_pdb
/tmp/cdash/source/PARAM/thetaml.5parm
51 opened
thetname_pdb
/tmp/cdash/source/PARAM/thetaml.5parm
51 opened
MPI: node= 0 iseed= -3059742
indpdb= 23 pdbref= T
ns= 0
Call Read_Bridge.
ns= 0
after etotal
OK: absdiff= 0, ene= 452.443000
