74.53s
Test: UNRES_remd_dfa
(Passed)
Build: homology Linux-gfortan-MPI E0LL2Y
(m10)
on 2024-02-19 03:27:09
Repository revision: e5301131661f6c05ad36e8aceadd77d37334772a
Histograms remd_dfa | File /tmp/cdash/homology/build/source/unres/src_MD/dfa/1L2Y_remd_ene_hist.png not found |
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Energy remd_dfa | File /tmp/cdash/homology/build/source/unres/src_MD/dfa/1L2Y_remd_Tene.png not found |
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Processors | [Graph]1 |
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Show Command Line/bin/sh "/tmp/cdash/homology/build/source/unres/src_MD/dfa/test_mpi_E0LL2Y.sh" "remd_dfa" "1" "8"
Show Test Time Graph
Show Failing/Passing Graph
Test outputCTEST_FULL_OUTPUT
nodes 8 rank 6
Processor 6 out of 8 rank in CG_COMM 6 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initialize nodes 8 rank 2
Processor 2 out of 8 rank in CG_COMM 2 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initialize nodes 8 rank 0
nodes 8 rank 1
Processor 0 out of 8 rank in CG_COMM 0 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Processor 1 out of 8 rank in CG_COMM 1 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initializeInside initialize nodes 8 rank 5
Processor 5 out of 8 rank in CG_COMM 5 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initialize nodes 8 rank 3
Processor 3 out of 8 rank in CG_COMM 3 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initialize nodes 8 rank 4
nodes 8 rank 7
Processor 4 out of 8 rank in CG_COMM 4 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Processor 7 out of 8 rank in CG_COMM 7 size of CG_COMM 8 size of FG_COMM 1 rank in FG_COMM1 0 size of FG_COMM1 1
Inside initializeInside initialize MPI: node= 1 iseed= -6119485
indpdb= 45 pdbref= T
Call Read_Bridge.
ns= 0
MPI: node= 6 iseed= -21418200
indpdb= 45 pdbref= T
Call Read_Bridge.
ns= 0
MPI: node= 2 iseed= -9179228
MPI: node= 0 iseed= -3059742
indpdb= 45 pdbref= T
indpdb= 45 pdbref= T
Call Read_Bridge.
ns= 0
MPI: node= 5 iseed= -18358457
MPI: node= 7 iseed= -24477943
MPI: node= 4 iseed= -15298714
Call Read_Bridge.
ns= 0
MPI: node= 3 iseed= -12238971
indpdb= 45 pdbref= T
indpdb= 45 pdbref= T
indpdb= 45 pdbref= T
indpdb= 45 pdbref= T
Call Read_Bridge.
ns= 0
Call Read_Bridge.
ns= 0
Call Read_Bridge.
ns= 0
Call Read_Bridge.
ns= 0
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
read_dfa_info finished!
Processor 1 0 0 ivec_start 1 ivec_end 76
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
ishiftca= 1 ilastca= 76
init_dfa_vars finished!
Processor 1 0 0 ivec_start 1 ivec_end 76
Processor 1 rest F restart1fie T
read_dfa_info finished!
Processor 6 0 0 ivec_start 1 ivec_end 76
Calling OVERLAP_SC
read_dfa_info finished!
Processor 2 0 0 ivec_start 1 ivec_end 76
read_dfa_info finished!
Processor 0 0 Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
Note: The following floating-point exceptions are signalling: IEEE_INVALID_FLAG IEEE_DIVIDE_BY_ZERO IEEE_UNDERFLOW_FLAG IEEE_DENORMAL
STOP Bye Bye...
0 ivec_start 1 ivec_end 76
read_dfa_info finished!
Processor 5 0 0 ivec_start 1 ivec_end 76
read_dfa_info finished!
Processor 4 0 0 ivec_start 1 ivec_end 76
read_dfa_info finished!
Processor 7 0 0 ivec_start 1 ivec_end 76
read_dfa_info finished!
Processor 3 0 0 ivec_start 1 ivec_end 76
Processor 6 0 0 ivec_start 1 ivec_end 76
Processor 2 0 0 ivec_start 1 ivec_end 76
Processor 6 rest F restart1fie T
Processor 0 0 0 ivec_start 1 ivec_end 76
Processor 5 0 0 ivec_start 1 ivec_end 76
Processor 4 0 0 ivec_start 1 ivec_end 76
Processor 7 0 0 ivec_start 1 ivec_end 76
Processor 2 rest F restart1fie T
Processor 0 rest F restart1fie T
Processor 5 rest F restart1fie T
Processor 4 rest F restart1fie T
Processor 7 rest F restart1fie T
Calling OVERLAP_SC
Processor 3 0 0 ivec_start 1 ivec_end 76
Calling OVERLAP_SC
Processor 3 rest F restart1fie T
Calling OVERLAP_SC
Calling OVERLAP_SC
Calling OVERLAP_SC
Calling OVERLAP_SC
Calling OVERLAP_SC
SC_move 4662 -101.25579237794292
Calling MINIM_DC
SC_move 4598 -139.70768240856975
Calling MINIM_DC
SC_move 4573 -110.58967993058545
Calling MINIM_DC
SC_move 4657 -147.39725656719924
Calling MINIM_DC
SC_move 4669 8.6353120386612616
Calling MINIM_DC
SC_move 4677 -137.52025231475517
Calling MINIM_DC
SC_move 4667 21.521553051675504
Calling MINIM_DC
SC_move 4676 -139.96822017911114
Calling MINIM_DC
CG processor 0 is finishing work.
CG processor 1 is finishing work.
CG processor 2 is finishing work.
CG processor 3 is finishing work.
CG processor 4 is finishing work.
CG processor 5 is finishing work.
CG processor 6 is finishing work.
CG processor 7 is finishing work.
RuntimeError: module compiled against API version 0xb but this version of numpy is 0xa
Traceback (most recent call last):
File "./matplotlib_hist.py", line 6, in <module>
import matplotlib.pyplot as plt
File "/usr/lib/python2.7/dist-packages/matplotlib/pyplot.py", line 32, in <module>
import matplotlib.colorbar
File "/usr/lib/python2.7/dist-packages/matplotlib/colorbar.py", line 32, in <module>
import matplotlib.artist as martist
File "/usr/lib/python2.7/dist-packages/matplotlib/artist.py", line 16, in <module>
from .path import Path
File "/usr/lib/python2.7/dist-packages/matplotlib/path.py", line 25, in <module>
from . import _path, rcParams
ImportError: numpy.core.multiarray failed to import
<DartMeasurementFile name="Histograms remd_dfa" type="image/png">/tmp/cdash/homology/build/source/unres/src_MD/dfa/1L2Y_remd_ene_hist.png</DartMeasurementFile>
<DartMeasurementFile name="Energy remd_dfa" type="image/png">/tmp/cdash/homology/build/source/unres/src_MD/dfa/1L2Y_remd_Tene.png</DartMeasurementFile>
ACC 1 240.00000 0.04040 99
ACC 2 260.00000 0.02020 99
ACC 3 280.00000 0.14141 99
ACC 4 300.00000 0.14141 99
ACC 5 320.00000 0.23232 99
ACC 6 340.00000 0.26263 99
ACC 7 360.00000 0.10101 99
average exchange = 0.134197