CTEST_FULL_OUTPUT
--------------------------------------------------------------------------
WARNING: Linux kernel CMA support was requested via the
btl_vader_single_copy_mechanism MCA variable, but CMA support is
not available due to restrictive ptrace settings.
The vader shared memory BTL will fall back on another single-copy
mechanism if one is available. This may result in lower performance.
Local host: dell15
--------------------------------------------------------------------------
Warning: ieee_inexact is signaling
FORTRAN STOP
Warning: ieee_inexact is signaling
FORTRAN STOP
Warning: ieee_inexact is signaling
FORTRAN STOP
Warning: ieee_inexact is signaling
FORTRAN STOP
--------------------------------------------------------------------------
mpirun has exited due to process rank 4 with PID 0 on
node dell15 exiting improperly. There are three reasons this could occur:
1. this process did not call "init" before exiting, but others in
the job did. This can cause a job to hang indefinitely while it waits
for all processes to call "init". By rule, if one process calls "init",
then ALL processes must call "init" prior to termination.
2. this process called "init", but exited without calling "finalize".
By rule, all processes that call "init" MUST call "finalize" prior to
exiting or it will be considered an "abnormal termination"
3. this process called "MPI_Abort" or "orte_abort" and the mca parameter
orte_create_session_dirs is set to false. In this case, the run-time cannot
detect that the abort call was an abnormal termination. Hence, the only
error message you will receive is this one.
This may have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
You can avoid this message by specifying -quiet on the mpirun command line.
--------------------------------------------------------------------------
[dell15:111154] 7 more processes have sent help message help-btl-vader.txt / cma-permission-denied
[dell15:111154] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
MPI: node= 2 iseed= -233290949
MPI: node= 4 iseed= -388818249
MPI: node= 0 iseed= -77763649
MPI: node= 6 iseed= -544345549
indpdb= 17 pdbref= T
MPI: node= 7 iseed= -622109199
MPI: node= 3 iseed= -311054599
MPI: node= 5 iseed= -466581899
MPI: node= 1 iseed= -155527299
indpdb= 17 pdbref= T
indpdb= 17 pdbref= T
indpdb= 17 pdbref= T
indpdb= 17 pdbref= T
Call Read_Bridge.
ns= 0
indpdb= 17 pdbref= T
indpdb= 17 pdbref= T
indpdb= 17 pdbref= T
Call Read_Bridge.
ns= 0
Call Read_Bridge.
ns= 0
Call Read_Bridge.
ns= 0
FATAL error - stat files empty