Site Name: dell15 Build Name: devel Linux-gfortan-MPI-DFA E0LL2Y
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Stamp: 20240403-2203-Nightly
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Time: 2024-04-04T03:46:08 CESTType: NightlyOS Name: LinuxOS Platform: x86_64OS Release: 3.13.0-170-genericOS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019Compiler Version: unknownCTest version: ctest-2.8.12.2History
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Stage: Update (0 errors, 0 warnings)
Start Time: 2024-04-04T03:46:07 CESTEnd Time: 2024-04-04T03:46:07 CESTUpdate Command: "/usr/bin/git" "fetch"Update Type: GITNumber of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2024-04-04T03:46:07 CESTEnd Time: 2024-04-04T03:46:07 CESTConfigure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source"Configure Return Value: 0Configure Output: -- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
View Configure Summary
Build (1 errors, 45 warnings)
Build command: /usr/bin/make -i -j4 Start Time: 2024-04-04T03:46:08 CESTEnd Time: 2024-04-04T03:46:44 CESTgfortran: error: unrecognized command line option ‘-shared-intel’
[100%] Built target UNRES_BIN-MD-M
View Errors Summary
Build Warnings (45)
[ 10%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/math.f.o
[ 11%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minima.f.o
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Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/scales.f.o
[ 11%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/.../source/source/cluster/unres/src/geomout.F:166.37:
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1
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/.../source/source/cluster/unres/src/geomout.F:167.29:
190 format (3X,11(1X,2I3,$))
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/.../source/source/cluster/wham/src-HCD-5D/energy_p_new.F:2365.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
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[ 13%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/hc.f.o
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/.../source/source/wham/src-HCD-5D/energy_p_new.F:2384.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
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[ 17%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cartprint.f.o
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[ 21%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/check_sc_distr.f.o [ 30%] Built target UNRES_XDRF2PDB_BIN-M
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/.../source/source/cluster/wham/src-HCD-5D/geomout.F:189.40:
180 format (I5,2F12.3,I2,$,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:190.29:
190 format (3X,11(1X,2I3,$))
1
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[ 33%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/initialize_p.F.o
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/.../source/source/unres/src-HCD-5D/initialize_p.F:463.28:
common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
1
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[ 41%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/permut.F.o
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Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readpdb-mult.F.o
/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:452.35:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:474.43:
call sccenter(ires_old,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:606.31:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
[ 49%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/misc.f.o
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[ 52%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rescode.f.o [ 55%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/mcm.F.o
[ 55%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/ssMD.F.o
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/.../source/source/unres/src-HCD-5D/MD_A-MTS.F:1656.23:
common /lbfgstat/ status,niter,nfun
1
Warning: Padding of 3 bytes required before 'niter' in COMMON 'lbfgstat' at (1); reorder elements or use -fno-align-commons
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Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/pinorm.f.o
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Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/slices.F.o
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Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MP.F.o
[ 67%] [ 67%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MREMD.F.o
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/.../source/source/unres/src-HCD-5D/MREMD.F:1400.29:
common /przechowalnia/ d_restart1,d_restart2
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (294912000 vs 147505152 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:1809.28:
common /przechowalnia/ d_restart1
1
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/.../source/source/unres/src-HCD-5D/MREMD.F:2004.28:
common /przechowalnia/ d_restart1
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (147456000 vs 294912000 bytes)
[ 68%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/refsys.f.o
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File: source/wham/src-HCD-5D/oligomer.F
Line: 37 /.../source/source/wham/src-HCD-5D/oligomer.F:37:0: warning: extra tokens at end of #endif directive [enabled by default]
#endif DEBUG
^
File: source/wham/src-HCD-5D/oligomer.F
Line: 87 /.../source/source/wham/src-HCD-5D/oligomer.F:87:0: warning: extra tokens at end of #endif directive [enabled by default]
#endif;
^
[ 68%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readrtns_compar.F.o
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Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readpdb-mult.F.o
/.../source/source/wham/src-HCD-5D/readpdb-mult.F:454.35:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
/.../source/source/wham/src-HCD-5D/readpdb-mult.F:476.43:
call sccenter(ires_old,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
/.../source/source/wham/src-HCD-5D/readpdb-mult.F:608.31:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
[ 69%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/boxshift.f.o
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/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1731.15:
do i=1,0
1
File: /tmp/cdash/devel/build/Warning: DO loop at
Line: 1 Warning: DO loop at (1) will be executed zero times
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1019.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (168000 vs 19200 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1020.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (392000024 vs 5120024 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1022.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (2016000 vs 230400 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1021.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (168000 vs 19200 bytes)
[ 70%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/cinfo.f.o
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write(istat,'(1x,$,20(i3,$))')
1 Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:381.25:
write(istat,'(1x,$,20(f5.1,f5.2$))')
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:384.25:
write(istat,'(1x,$,20(f5.1$))')
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:387.24:
write(istat,'(1x,$,20(i1,$))')
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:393.27:
write (istat,'(100(i1,$))')(iclass(k,j),
1
Warning: $ should be the last specifier in format at (1)
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do i=1,0
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/.../source/source/wham/src-HCD-5D/dfa.F:1020.20:
common /sheca/ bx,by,bz
1
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/.../source/source/wham/src-HCD-5D/dfa.F:1021.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
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/.../source/source/wham/src-HCD-5D/dfa.F:1023.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (2016000 vs 230400 bytes)
/.../source/source/wham/src-HCD-5D/dfa.F:1022.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (168000 vs 19200 bytes)
[ 81%] [ 81%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/ran.f.o
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/.../source/source/unres/src-HCD-5D/unres.F:415.23:
common /lbfgstat/ status,niter,nfun
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/.../source/source/unres/src-HCD-5D/unres.F:229.23:
common /lbfgstat/ status,niter,nfun
1
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/.../source/source/unres/src-HCD-5D/lbfgs.F:85.23:
common /lbfgstat/ status,niter,ncalls
1
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/.../source/source/unres/src-HCD-5D/dfa.F:1818.15:
do i=1,0
1
Warning: DO loop at (1) will be executed zero times
/.../source/source/unres/src-HCD-5D/dfa.F:1106.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (72000 vs 19200 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1107.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (72000024 vs 5120024 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1109.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (864000 vs 230400 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1108.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (72000 vs 19200 bytes)
/.../source/source/unres/src-HCD-5D/energy_p_new-sep_barrier.F:1625.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj
1
Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (32 vs 40 bytes)
/.../source/source/unres/src-HCD-5D/energy_p_new_barrier.F:9167.28:
common /przechowalnia/ zapas
1
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/.../source/source/unres/src-HCD-5D/energy_p_new_barrier.F:3996.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
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[100%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cinfo.f.o
Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_E0LL2Y_HCD-5D_DFA.exe
View Warnings Summary
Test (13 passed, 21 failed, 0 not run)
View Tests Summary