CDash : UNRES

Site Name: dell15
Build Name: devel Linux-gfortan-MPI-DFA NEWCORR (view notes)
Stamp: 20240402-2203-Nightly (related builds)
Time: 2024-04-03T03:47:17 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-170-generic
OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019
Compiler Version: unknown
CTest version: ctest-2.8.12.2

Current Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	1	45
Test	21	0

Previous Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	1	45
Test	21	0

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Stage: Update (0 errors, 0 warnings)

Start Time: 2024-04-03T03:47:16 CEST
End Time: 2024-04-03T03:47:16 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2024-04-03T03:47:16 CEST
End Time: 2024-04-03T03:47:16 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=NEWCORR -DUNRES_DFA=1 -DUNRES_CSA_FF=NEWCORR -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source"
Configure Return Value: 0
Configure Output:

-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build

View Configure Summary

Build (1 errors, 45 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2024-04-03T03:47:17 CEST
End Time: 2024-04-03T03:47:53 CEST

gfortran: error: unrecognized command line option ‘-shared-intel’

[100%] Built target UNRES_BIN-MD-M

View Errors Summary

Build Warnings (45)

[  7%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/fitsq.f.o
[  8%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/linmin.f.o
[  8%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/math.f.o
[  8%] [  9%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/enecalc1.F.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minima.f.o
[  9%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/output.f.o
/.../source/source/cluster/wham/src-HCD-5D/energy_p_new.F:2365.22:

      common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij     
                      1

Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (40 vs 32 bytes)

[  9%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/scales.f.o
[  9%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/energy_p_new.F.o
[  9%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/add.f.o
[  9%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/arcos.f.o
[ 10%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/banach.f.o
[ 10%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/bank.F.o
/.../source/source/wham/src-HCD-5D/energy_p_new.F:2384.22:

      common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij     
                      1

Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (40 vs 32 bytes)

[ 10%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/blas.f.o
[ 11%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/initialize_p.F.o
[ 12%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/bond_move.f.o
[ 12%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cartprint.f.o
[ 13%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/chainbuild.F.o
[ 13%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/check_bond.f.o
[ 13%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/molread_zs.F.o
[ 13%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/checkder_p.F.o
[ 14%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/check_sc_distr.f.o
[ 14%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/openunits.F.o

[ 16%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/convert.f.o
[ 16%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cored.f.o
[ 17%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/csa.f.o
[ 17%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/read_constr_homology.F.o
[ 17%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/dihed_cons.F.o
[ 18%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/geomout.F.o
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:189.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/cluster/wham/src-HCD-5D/geomout.F:190.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

[ 18%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/diff12.f.o
[ 19%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/distfit.f.o
[ 19%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
[ 19%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/hc.f.o
[ 19%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/djacob.f.o
[ 20%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/icant.f.o
[ 21%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/arcos.f.o
[ 22%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/econstr_local.F.o
[ 22%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/eigen.f.o
[ 22%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/cartprint.f.o

[ 34%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/gnmr1.f.o
[ 34%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/indexx.f.o
[ 35%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/initialize_p.F.o
Scanning dependencies of target UNRES_CLUSTER_BIN
[ 35%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/arcos.f.o
/.../source/source/unres/src-HCD-5D/initialize_p.F:1326.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
                            1
[ 36%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/cartprint.f.o

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6150168 vs 6676504 bytes)

/.../source/source/unres/src-HCD-5D/initialize_p.F:1416.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6150168 vs 6676504 bytes)

[ 36%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/chainbuild.f.o
[ 36%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/contact.f.o
[ 37%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/convert.f.o
[ 37%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/fitsq.f.o
[ 37%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/permut.F.o
[ 38%] [ 38%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/pinorm.f.o
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/.../source/source/cluster/unres/src/geomout.F:166.37:

  180 format (I5,F12.3,I2,8(1X,2I3,$))

Warning: $ should be the last specifier in format at (1)

/.../source/source/cluster/unres/src/geomout.F:167.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

[ 38%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/printmat.f.o
[ 38%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/probabl.F.o
[ 39%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/hc.f.o
[ 40%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/read_coords.F.o
[ 40%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/iperm.f.o
[ 40%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/pinorm.f.o
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Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/initialize.f.o
[ 41%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/rescode.f.o

[ 42%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/intcor.f.o
[ 43%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/setup_var.f.o
[ 43%] [ 43%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/main_clust.F.o
Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/slices.F.o
[ 43%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/store_parm.F.o
[ 43%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readpdb-mult.F.o
/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:452.35:

            call sccenter(ires,iii,sccor)                               
                                   1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:474.43:

                call sccenter(ires_old,iii,sccor)                       
                                           1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:606.31:

        call sccenter(ires,iii,sccor)                                   
                               1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

[ 43%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/matmult.f.o
[ 44%] [ 45%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/misc.f.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/intcor.f.o
[ 45%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/int_to_cart.f.o
[ 45%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/noyes.f.o
[ 46%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/pinorm.f.o
[ 46%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/readpdb.f.o
[ 47%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readrtns.F.o
[ 48%] [ 48%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/timing.F.o
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/readrtns.F.o

Build Log line 212

File: source/wham/src-HCD-5D/oligomer.F Line: 37

[ 52%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rescode.f.o
[ 52%] [ 53%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/map.F.o
Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/PMFprocess.F.o
[ 53%] Linking Fortran executable ../../../../bin/cluster_unres_gfortran.exe
Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/setup_var.f.o
[ 54%] [ 54%] Built target UNRES_CLUSTER_BIN
Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/srtclust.f.o
[ 54%] [ 55%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/ssMD.F.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/matmult.f.o
[ 55%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/oligomer.F.o

/.../source/source/wham/src-HCD-5D/oligomer.F:37:0: warning: extra tokens at end of #endif directive [enabled by default]

 #endif DEBUG
 ^

Build Log line 215

File: source/wham/src-HCD-5D/oligomer.F Line: 87

/.../source/source/wham/src-HCD-5D/oligomer.F:87:0: warning: extra tokens at end of #endif directive [enabled by default]

 #endif;
 ^
[ 55%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/mc.F.o
[ 56%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/mcm.F.o
[ 56%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readrtns_compar.F.o
[ 57%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readpdb-mult.F.o
/.../source/source/wham/src-HCD-5D/readpdb-mult.F:454.35:

            call sccenter(ires,iii,sccor)                               
                                   1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

/.../source/source/wham/src-HCD-5D/readpdb-mult.F:476.43:

                call sccenter(ires_old,iii,sccor)                       
                                           1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

/.../source/source/wham/src-HCD-5D/readpdb-mult.F:608.31:

        call sccenter(ires,iii,sccor)                                   
                               1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)

[ 57%] [ 58%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/timing.F.o
Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/track.F.o
[ 58%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MD_A-MTS.F.o
[ 58%] [ 58%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/wrtclust.f.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minimize_p.F.o
/.../source/source/unres/src-HCD-5D/MD_A-MTS.F:1656.23:

      common /lbfgstat/ status,niter,nfun                               
                       1

Warning: Padding of 3 bytes required before 'niter' in COMMON 'lbfgstat' at (1); reorder elements or use -fno-align-commons

[ 59%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/work_partition.F.o
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Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rmscalc.F.o
[ 63%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/.../source/source/wham/src-HCD-5D/conf_compar.F:378.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-HCD-5D/conf_compar.F:381.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-HCD-5D/conf_compar.F:384.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-HCD-5D/conf_compar.F:387.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-HCD-5D/conf_compar.F:393.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

Warning: $ should be the last specifier in format at (1)

[ 63%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rmsnat.f.o
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Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/angnorm.f.o
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       do i=1,0                                                         
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       do i=1,0                                                         
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      common /sheca/     bx,by,bz                                       
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      common /lbfgstat/ status,niter,ncalls                             
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       do i=1,0                                                         
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      common /sheca/     bx,by,bz                                       
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      common /shee/      vbeta,vbet,vbetp,vbetm                         
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      common /shef/      shefx, shefy, shefz                            
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      common /shetf/     shetfx,shetfy,shetfz                           
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View Warnings Summary

Test (14 passed, 21 failed, 0 not run)

View Tests Summary