Site Name: dell15
Build Name: Linux-gfortan-MPI GAB (view notes)
Stamp: 20240402-2203-Nightly (related builds)
Time: 2024-04-03T03:05:06 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-170-generic
OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019
Compiler Version: unknown
CTest version: ctest-2.8.12.2

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Stage: Update (0 errors, 0 warnings)

Start Time: 2024-04-03T03:05:02 CEST
End Time: 2024-04-03T03:05:05 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2024-04-03T03:05:05 CEST
End Time: 2024-04-03T03:05:05 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=GAB -DUNRES_CSA_FF=GAB -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/source"
Configure Return Value: 0
Configure Output: 
-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
MPI_Fortran_INCLUDE_PATH
/users/local/mpich2-1.4.1p1_gnu/include -I/users/local/mpich2-1.4.1p1_gnu/include
MPI_Fortran_LIBRARIES
/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpich.so/users/local/mpich2-1.4.1p1_gnu/lib/libopa.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpl.so/usr/lib/x86_64-linux-gnu/librt.so/usr/lib/x86_64-linux-gnu/libpthread.so
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2024-04-03T03:05:06 CEST
End Time: 2024-04-03T03:05:48 CEST

View Errors Summary


Build Warnings (50)
Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/checkder_p.F.o
Linking C static library libxdrf.a
[  3%] Built target xdrf
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/tmp/cdash/source/source/cluster/unres/src/geomout.F:166.38:

  180 format (I5,2F12.3,I2,8(1X,2I3,$))                                 
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/tmp/cdash/source/source/cluster/unres/src/geomout.F:167.29:

  190 format (3X,11(1X,2I3,$))                                          
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[  4%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/econstr_local.F.o
Scanning dependencies of target UNRES_BIN-MD
[  5%] [  5%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/add.f.o
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Build Log line 109


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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1728.15:

       do i=1,0                                                         
               1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1077.26:

      call sheetforce(nca,wshet)                                        
                          1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1016.20:

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      common /shetf/     shetfx,shetfy,shetfz                           
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/tmp/cdash/source/source/unres/src_MIN/energy_p_new_barrier.F:6801.28:

      common /przechowalnia/ zapas                                      
                            1

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/tmp/cdash/source/source/unres/src_CSA/energy_p_new_barrier.F:6447.28:

      common /przechowalnia/ zapas                                      
                            1
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[ 24%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/geomout.F.o
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/tmp/cdash/source/source/unres/src_MD/initialize_p.F:295.28:

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/tmp/cdash/source/source/unres/src_MD/initialize_p.F: In function ‘init_int_table’:

Build Log line 196


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/tmp/cdash/source/source/unres/src_MD/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

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COMMON.LANGEVIN.lang0:6.23:
    Included at /tmp/cdash/source/source/unres/src_MD/lagrangian_lesyng.F:655:

      common /langforc/ friction,stochforc,                             
                       1

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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F: In function ‘init_int_table’:

Build Log line 242


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             ielstart_all(j,i)=0
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      common /gucio/ cm,energia_short                                   
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      common /gucio/ cm                                                 
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      common /gucio/ cm                                                 
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Build Log line 277


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       common /przechowalnia/ d_restart1,d_restart2                     
                             1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1636.28:

      common /przechowalnia/ d_restart1                                 
                            1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1823.28:

      common /przechowalnia/ d_restart1                                 
                            1

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/tmp/cdash/source/source/unres/src_MD/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

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/tmp/cdash/source/source/unres/src_MD/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

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[ 50%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/ssMD.F.o
[ 51%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/TMscore_subroutine.f.o
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/tmp/cdash/source/source/unres/src_MD/energy_p_new_barrier.F:6524.28:

      common /przechowalnia/ zapas                                      
                            1

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/tmp/cdash/source/source/unres/src_MD-M/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

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/tmp/cdash/source/source/unres/src_MD-M/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

Warning: Named COMMON block 'syfek' at (1) shall be of the same size as elsewhere (20800 vs 62400 bytes)

[ 60%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/energy_p_new-sep_barrier.F.o
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[ 61%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/parmread.F.o
[ 62%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/surfatom.f.o
[ 62%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/test.F.o
[ 62%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/pinorm.f.o
[ 62%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/printmat.f.o
[ 62%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/rescode.f.o
[ 66%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/openunits.F.o
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[ 66%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/readrtns.F.o
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/tmp/cdash/source/source/unres/src_MD-M/energy_p_new_barrier.F:6278.28:

      common /przechowalnia/ zapas                                      
                            1

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[ 66%] [ 66%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/contact.f.o
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[ 67%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/conf_compar.F.o
/tmp/cdash/source/source/wham/src/conf_compar.F:349.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:352.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:355.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:358.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:364.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

Warning: $ should be the last specifier in format at (1)

[ 68%] [ 69%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/match_contact.f.o
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[ 77%] [ 77%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/energy_p_new.F.o
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/tmp/cdash/source/source/cluster/wham/src/geomout.F:167.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src/geomout.F:168.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

[ 77%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/readrtns_compar.F.o
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[ 79%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/gradient_p.F.o
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[ 79%] [ 79%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/contfunc.f.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cont_frag.f.o
[ 80%] [ 80%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/cinfo.f.o
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Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/tmp/cdash/source/source/wham/src-M/conf_compar.F:370.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:373.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:376.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:379.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:385.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

Warning: $ should be the last specifier in format at (1)

[ 81%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/match_contact.f.o
Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_GAB.exe
[ 81%] Built target UNRES_BIN-MD-M
[ 81%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/angnorm.f.o
Scanning dependencies of target xdrf2ang
[ 81%] Scanning dependencies of target UNRES_CLUSTER_WHAM_M_BIN
Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2ang.dir/xdrf2ang.f.o
[ 82%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/arcos.f.o
[ 82%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/cartprint.f.o
[ 82%] [ 82%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/chainbuild.f.o
[ 93%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/readpdb.f.o
[ 94%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/readrtns.F.o
[ 94%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/rescode.f.o
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[ 94%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/geomout.F.o
Linking Fortran executable ../../../bin/xdrf2pdb-mult
/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:173.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:174.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/geomout.F:190:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1
Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons
[ 94%] Built target UNRES_XDRF2PDB_BIN-M
[ 94%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
[ 94%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/rescode.f.o
[ 94%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/hc.f.o
The maximum number of reported warnings or errors has been reached!!!


View Warnings Summary


Test (9  passed, 0 failed, 0 not run)
 
View Tests Summary