Site Name: dell15
Build Name: Linux-gfortan-MPI E0LL2Y (view notes)
Stamp: 20240331-2203-Nightly (related builds)
Time: 2024-04-01T03:06:01 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-170-generic
OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019
Compiler Version: unknown
CTest version: ctest-2.8.12.2

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Stage: Update (0 errors, 0 warnings)

Start Time: 2024-04-01T03:05:59 CEST
End Time: 2024-04-01T03:06:00 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2024-04-01T03:06:00 CEST
End Time: 2024-04-01T03:06:00 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/source"
Configure Return Value: 0
Configure Output: 
-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
MPI_Fortran_INCLUDE_PATH
/users/local/mpich2-1.4.1p1_gnu/include -I/users/local/mpich2-1.4.1p1_gnu/include
MPI_Fortran_LIBRARIES
/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpich.so/users/local/mpich2-1.4.1p1_gnu/lib/libopa.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpl.so/usr/lib/x86_64-linux-gnu/librt.so/usr/lib/x86_64-linux-gnu/libpthread.so
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2024-04-01T03:06:01 CEST
End Time: 2024-04-01T03:06:43 CEST

View Errors Summary


Build Warnings (50)
Linking C static library libxdrf.a
[  3%] Built target xdrf
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Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/tmp/cdash/source/source/cluster/unres/src/geomout.F:166.38:

  180 format (I5,2F12.3,I2,8(1X,2I3,$))                                 
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/tmp/cdash/source/source/cluster/unres/src/geomout.F:167.29:

  190 format (3X,11(1X,2I3,$))                                          
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[  4%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/econstr_local.F.o
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[  7%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/chainbuild.F.o
Build Log line 74


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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1728.15:

       do i=1,0                                                         
               1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1077.26:

      call sheetforce(nca,wshet)                                        
                          1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1016.20:

      common /sheca/     bx,by,bz                                       
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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1017.19:

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1019.19:

      common /shef/      shefx, shefy, shefz                            
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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1018.20:

      common /shetf/     shetfx,shetfy,shetfz                           
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[ 12%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/rescode.f.o
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      common /przechowalnia/ zapas                                      
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/tmp/cdash/source/source/unres/src_MIN/energy_p_new_barrier.F:6801.28:

      common /przechowalnia/ zapas                                      
                            1

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/tmp/cdash/source/source/unres/src_MD/initialize_p.F: In function ‘init_int_table’:

Build Log line 220


  File: source/unres/src_MD/initialize_p.F
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/tmp/cdash/source/source/unres/src_MD/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
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/tmp/cdash/source/source/unres/src_CSA/initialize_p.F: In function ‘init_int_table’:

Build Log line 230


  File: source/unres/src_CSA/initialize_p.F
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/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
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Build Log line 233


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         do i=0,maxprocs-1
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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F:293.28:

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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F: In function ‘init_int_table’:

Build Log line 244


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             ielstart_all(j,i)=0
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      common /langforc/ friction,stochforc,                             
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      common /gucio/ cm                                                 
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      common /przechowalnia/ d_restart1                                 
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (39321600 vs 78643200 bytes)

[ 40%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/moments.f.o
[ 40%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/pinorm.f.o
[ 41%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/printmat.f.o
[ 41%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/parmread.F.o
[ 41%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/prng_32.F.o
[ 41%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/MP.F.o
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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1239.29:

       common /przechowalnia/ d_restart1,d_restart2                     
                             1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1636.28:

      common /przechowalnia/ d_restart1                                 
                            1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1823.28:

      common /przechowalnia/ d_restart1                                 
                            1

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[ 44%] [ 44%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/printmat.f.o
Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/prng_32.F.o
[ 44%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/rmdd.f.o
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Scanning dependencies of target UNRES_WHAM_BIN
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Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/rmsd.F.o
[ 49%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/sc_move.F.o
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/tmp/cdash/source/source/unres/src_MD/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

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/tmp/cdash/source/source/unres/src_MD/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

Warning: Named COMMON block 'syfek' at (1) shall be of the same size as elsewhere (12800 vs 38400 bytes)

[ 50%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/permut.F.o
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[ 51%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/pinorm.f.o
[ 51%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/printmat.f.o
[ 51%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/prng_32.F.o
[ 51%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/sumsld.f.o
[ 51%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/q_measure.F.o
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Linking Fortran executable ../../../bin/unresCSA_gfortran_MPI_E0LL2Y.exe
[ 54%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/regularize.F.o
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[ 54%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/rescode.f.o
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[ 54%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/rmdd.f.o
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/tmp/cdash/source/source/unres/src_MD/energy_p_new_barrier.F:6524.28:

      common /przechowalnia/ zapas                                      
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (57344000 vs 21299200 bytes)

[ 55%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/rmsd.F.o
[ 56%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/sc_move.F.o
[ 56%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/shift.F.o
[ 56%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/gradient_p.F.o
[ 56%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/sort.f.o
[ 56%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/initialize_p.F.o
[ 56%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/molread_zs.F.o
[ 56%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/stochfric.F.o
/tmp/cdash/source/source/unres/src_MD-M/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (135210400 vs 54080000 bytes)

/tmp/cdash/source/source/unres/src_MD-M/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

Warning: Named COMMON block 'syfek' at (1) shall be of the same size as elsewhere (20800 vs 62400 bytes)

[ 56%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/sumsld.f.o
Scanning dependencies of target UNRES_WHAM_M_BIN
[ 57%] [ 57%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/openunits.F.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
[ 57%] [ 58%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/readrtns.F.o
Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/surfatom.f.o
[ 58%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/bxread.F.o
[ 58%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/test.F.o
[ 59%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/xread.F.o
[ 59%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cxread.F.o
[ 64%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/rescode.f.o
[ 65%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/setup_var.f.o
[ 65%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/contact.f.o
[ 65%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/slices.F.o
[ 65%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/convert.f.o
[ 65%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/ssMD.F.o
/tmp/cdash/source/source/unres/src_MD-M/energy_p_new_barrier.F:6278.28:

      common /przechowalnia/ zapas                                      
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (93184000 vs 34611200 bytes)

[ 66%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/energy_p_new.F.o
[ 66%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/store_parm.F.o
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[ 67%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/wham_calc1.F.o
[ 67%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/readrtns_compar.F.o
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[ 68%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/conf_compar.F.o
/tmp/cdash/source/source/wham/src/conf_compar.F:349.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:352.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:355.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:358.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src/conf_compar.F:364.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

Warning: $ should be the last specifier in format at (1)

[ 69%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/molread_zs.F.o
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Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cartder.f.o
/tmp/cdash/source/source/cluster/wham/src/geomout.F:167.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src/geomout.F:168.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

[ 71%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/rmscalc.f.o
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Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/gnmr1.f.o
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[ 73%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/intcor.f.o
Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2pdb.dir/nazwy.f.o
Linking Fortran executable ../../../bin/xdrf2pdb
[ 88%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/fitsq.f.o
[ 88%] Built target xdrf2pdb
[ 88%] [ 89%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cont_frag.f.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/tmp/cdash/source/source/wham/src-M/conf_compar.F:370.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:373.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:376.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:379.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:385.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

Warning: $ should be the last specifier in format at (1)

Scanning dependencies of target xdrf2pdb-m
[ 89%] Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2pdb-m.dir/xdrf2pdb-m.F.o
[ 90%] Scanning dependencies of target xdrf2x
Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2pdb-m.dir/geomout.F.o
[ 91%] Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2x.dir/xdrf2x.F.o
[ 91%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/match_contact.f.o
Linking Fortran executable ../../../bin/xdrf2x
[ 91%] Built target xdrf2x
[ 91%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/angnorm.f.o
[ 91%] Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2pdb-m.dir/misc.f.o
[ 95%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/define_pairs.f.o
[ 95%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/rescode.f.o
[ 95%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/nazwy.f.o
[ 95%] [ 95%] Linking Fortran executable ../../../bin/xdrf2pdb-mult
Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/geomout.F.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/mysort.f.o
/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:173.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:174.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/geomout.F:190:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1
Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons
[ 95%] Built target UNRES_XDRF2PDB_BIN-M
[ 95%] [ 95%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cinfo.f.o
Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
[ 95%] [ 95%] Building C object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/proc_proc.c.o
The maximum number of reported warnings or errors has been reached!!!


View Warnings Summary


Test (48  passed, 0 failed, 0 not run)
 
View Tests Summary