Site Name: dell15 Build Name: devel Linux-gfortan-MPI-DFA NEWCORR
(view notes)
Stamp: 20230329-2203-Nightly
(related builds)
Time: 2023-03-30T03:47:30 CEST Type: Nightly
OS Name: Linux OS Platform: x86_64 OS Release: 3.13.0-170-generic OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019 Compiler Version: unknown CTest version: ctest-2.8.12.2
Start Time: 2023-03-30T03:47:28 CEST End Time: 2023-03-30T03:47:28 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2023-03-30T03:47:28 CEST End Time: 2023-03-30T03:47:28 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=NEWCORR -DUNRES_DFA=1 -DUNRES_CSA_FF=NEWCORR -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
[ 9%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/fitsq.f.o
[ 10%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/energy_p_new.F.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/linmin.f.o
[ 10%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/math.f.o
[ 10%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/enecalc1.F.o
[ 11%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minima.f.o
/.../source/source/cluster/wham/src-HCD-5D/energy_p_new.F:2365.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (40 vs 32 bytes)
[ 11%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/.../source/source/cluster/unres/src/geomout.F:166.37:
180 format (I5,F12.3,I2,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/unres/src/geomout.F:167.29:
190 format (3X,11(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
[ 11%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/output.f.o
[ 11%] [ 12%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/scales.f.o
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/hc.f.o
[ 12%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/add.f.o
[ 12%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/arcos.f.o
[ 12%] [ 13%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/initialize.f.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/banach.f.o
[ 14%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/intcor.f.o
[ 14%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/bank.F.o
[ 14%] [ 14%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/energy_p_new.F.o
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/main_clust.F.o
/.../source/source/wham/src-HCD-5D/energy_p_new.F:2384.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (40 vs 32 bytes)
[ 14%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/matmult.f.o
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[ 15%] [ 15%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/blas.f.o
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/noyes.f.o
[ 16%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/pinorm.f.o
[ 16%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/readpdb.f.o
[ 17%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/bond_move.f.o
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Linking Fortran executable ../../../../bin/cluster_unres_gfortran.exe
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Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/convert.f.o
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[ 23%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/fitsq.f.o
[ 24%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/geomout.F.o
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:189.40:
180 format (I5,2F12.3,I2,$,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:190.29:
190 format (3X,11(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
[ 25%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/csa.f.o
[ 25%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
[ 25%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/hc.f.o
[ 26%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/icant.f.o
[ 26%] [ 26%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/dihed_cons.F.o
Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/initialize_p.F.o
[ 27%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/intcor.f.o
Scanning dependencies of target UNRES_XDRF2PDBM_BIN-M
[ 27%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDBM_BIN-M.dir/xdrf2pdb-m.F.o
[ 27%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/int_from_cart1.f.o
Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/make_ensemble1.F.o
[ 44%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/gnmr1.f.o
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/indexx.f.o
[ 44%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/matmult.f.o
[ 45%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/initialize_p.F.o
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/.../source/source/unres/src-HCD-5D/initialize_p.F:1326.28:
common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6150168 vs 6676504 bytes)
/.../source/source/unres/src-HCD-5D/initialize_p.F:1416.28:
common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6150168 vs 6676504 bytes)
[ 46%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/misc.f.o
[ 46%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readpdb-mult.F.o
[ 46%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/mygetenv.F.o
/.../source/source/cluster/wham/src-HCD-5D/readpdb-mult.F:452.35:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
File: /tmp/cdash/devel/build/Warning: DO loop at
Line: 1
Warning: DO loop at (1) will be executed zero times
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1019.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (168000 vs 19200 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1020.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (392000024 vs 5120024 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1022.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (2016000 vs 230400 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1021.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (168000 vs 19200 bytes)
[ 69%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/cinfo.f.o
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/.../source/source/unres/src-HCD-5D/MREMD.F:1400.29:
common /przechowalnia/ d_restart1,d_restart2
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (294912000 vs 147505152 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:1809.28:
common /przechowalnia/ d_restart1
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (147456000 vs 294912000 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:2004.28:
common /przechowalnia/ d_restart1
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (147456000 vs 294912000 bytes)
[ 71%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/muca_md.F.o
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[ 71%] [ 72%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/newconf.f.o
Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/elecont.f.o
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/.../source/source/wham/src-HCD-5D/conf_compar.F:378.24:
write(istat,'(1x,$,20(i3,$))')
1
Warning: $ should be the last specifier in format at (1)
File: /tmp/cdash/devel/build/Warning: DO loop at
Line: 1
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new-sep_barrier.F.o
/.../source/source/unres/src-HCD-5D/dfa.F:1818.15:
do i=1,0
1
Warning: DO loop at (1) will be executed zero times
/.../source/source/unres/src-HCD-5D/dfa.F:1106.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (72000 vs 19200 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1107.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (72000024 vs 5120024 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1109.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (864000 vs 230400 bytes)
/.../source/source/unres/src-HCD-5D/dfa.F:1108.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (72000 vs 19200 bytes)
/.../source/source/unres/src-HCD-5D/energy_p_new-sep_barrier.F:1625.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj
1
Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (32 vs 40 bytes)
/.../source/source/unres/src-HCD-5D/energy_p_new_barrier.F:3996.22:
common /lipcalc/ sslipi,sslipj,ssgradlipi,ssgradlipj,faclipij
1
Warning: Named COMMON block 'lipcalc' at (1) shall be of the same size as elsewhere (40 vs 32 bytes)
[ 99%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/gradient_p.F.o
[100%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cinfo.f.o
Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_NEWCORR_HCD-5D_DFA.exe