Start Time: 2020-05-02T03:47:57 CEST End Time: 2020-05-02T03:47:57 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2020-05-02T03:47:57 CEST End Time: 2020-05-02T03:47:57 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is GNU 7.5.0
-- The C compiler identification is GNU 7.5.0
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
MPI found
Detected 64-bit architecture
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
Build command: /usr/bin/cmake --build . --config "Release" -- -i -j4 Start Time: 2020-05-02T03:48:01 CEST End Time: 2020-05-02T03:48:19 CEST
Error: Operands of comparison operator '.gt.' at (1) are LOGICAL(4)/INTEGER(4)
[ 66%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/TMscore.F.o
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wham_multparm.F:(.text+0x96): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0xa6): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0xaf): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0xe2): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0x118): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0x11f): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0x12a): relocation truncated to fit: R_X86_64_PC32 against symbol `mpi_data_' defined in COMMON section in CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
wham_multparm.F:(.text+0x34c): additional relocation overflows omitted from the output
collect2: error: ld returned 1 exit status
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gfortran: error: CMakeFiles/UNRES_BIN-MD-M.dir/MD_A-MTS.F.o: No such file or directory
gfortran: error: unrecognized command line option '-shared-intel'; did you mean '-shared-libgcc'?
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/.../source/source/cluster/unres/src/geomout.F:166:37:
180 format (I5,F12.3,I2,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/unres/src/geomout.F:167:29:
190 format (3X,11(1X,2I3,$))
1
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/.../source/source/cluster/wham/src-HCD-5D/geomout.F:173:40:
180 format (I5,2F12.3,I2,$,8(1X,2I3,$))
1
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/.../source/source/cluster/wham/src-HCD-5D/geomout.F:174:29:
190 format (3X,11(1X,2I3,$))
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[ 28%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDBM_BIN-M.dir/misc.f.o
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common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
1
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common /przechowalnia/ Gcopy
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/.../source/source/unres/src-HCD-5D/MD_A-MTS.F:432:39:
if (potEcomp(0).gt.0.99e20 .or. isnan(potEcomp(0)).gt.0) then
1
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common /shee/ vbeta,vbet,vbetp,vbetm
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common /shef/ shefx, shefy, shefz
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common /shetf/ shetfx,shetfy,shetfz
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common /przechowalnia/ d_restart1
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common /przechowalnia/ d_restart1
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call sccenter(ires,iii,sccor)
1
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common /sheca/ bx,by,bz
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/.../source/source/wham/src-HCD-5D/dfa.F:1021:19:
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common /shef/ shefx, shefy, shefz
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/.../source/source/wham/src-HCD-5D/dfa.F:1022:20:
common /shetf/ shetfx,shetfy,shetfz
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