Start Time: 2020-04-06T03:48:08 CEST End Time: 2020-04-06T03:48:09 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2020-04-06T03:48:09 CEST End Time: 2020-04-06T03:48:09 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is GNU 7.5.0
-- The C compiler identification is GNU 7.5.0
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
MPI found
Detected 64-bit architecture
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
[ 9%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/fitsq.f.o
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/.../source/source/cluster/unres/src/geomout.F:166:37:
180 format (I5,F12.3,I2,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/unres/src/geomout.F:167:29:
190 format (3X,11(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
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/.../source/source/cluster/wham/src-HCD-5D/geomout.F:173:40:
180 format (I5,2F12.3,I2,$,8(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:174:29:
190 format (3X,11(1X,2I3,$))
1
Warning: $ should be the last specifier in format at (1)
[ 30%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
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Scanning dependencies of target UNRES_XDRF2PDB_BIN-M
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/.../source/source/unres/src-HCD-5D/initialize_p.F:458:28:
common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (7290904 vs 6764568 bytes)
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/.../source/source/unres/src-HCD-5D/minimize_p.F:202:28:
common /przechowalnia/ Gcopy
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (348480000 vs 1569507016 bytes)
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/.../source/source/unres/src-HCD-5D/MD_A-MTS.F:432:39:
if (potEcomp(0).gt.0.99e20 .or. isnan(potEcomp(0)).gt.0) then
1
common /sheca/ bx,by,bz
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/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1020:19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (11520024 vs 5120024 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1022:19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (345600 vs 230400 bytes)
/.../source/source/cluster/wham/src-HCD-5D/dfa.F:1021:20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (28800 vs 19200 bytes)
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common /przechowalnia/ d_restart1,d_restart2
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (324403200 vs 162250752 bytes)
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common /przechowalnia/ d_restart1
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (162201600 vs 324403200 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:1957:28:
common /przechowalnia/ d_restart1
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (162201600 vs 324403200 bytes)
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/.../source/source/wham/src-HCD-5D/readpdb.F:569:35:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1) [-Wargument-mismatch]