Site Name: m10
Build Name: devel Linux-gfortan-MPI NEWCORR (view notes)
Stamp: 20200405-2203-Nightly (related builds)
Time: 2020-04-06T03:47:42 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 4.15.0-55-generic
OS Version: #60-Ubuntu SMP Tue Jul 2 18:22:20 UTC 2019
CTest version: ctest-3.10.2

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Stage: Update (0 errors, 0 warnings)

Start Time: 2020-04-06T03:47:37 CEST
End Time: 2020-04-06T03:47:38 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2020-04-06T03:47:38 CEST
End Time: 2020-04-06T03:47:38 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=NEWCORR -DUNRES_DFA=0 -DUNRES_CSA_FF=NEWCORR -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source"
Configure Return Value: 0
Configure Output: 
-- The Fortran compiler identification is GNU 7.5.0
-- The C compiler identification is GNU 7.5.0
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
MPI found
Detected 64-bit architecture
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build

View Configure Summary

Build (2 errors, 21 warnings)

Build command: /usr/bin/cmake --build . --config "Release" -- -i -j4
Start Time: 2020-04-06T03:47:42 CEST
End Time: 2020-04-06T03:48:00 CEST

[ 64%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/seq2chains.f.o
[ 64%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/chain_symmetry.F.o
[ 64%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_calc1.F.o
[ 65%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/iperm.f.o
[ 65%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MD_A-MTS.F.o
[ 65%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rmscalc.F.o
/.../source/source/unres/src-HCD-5D/MD_A-MTS.F:432:39:

         if (potEcomp(0).gt.0.99e20 .or. isnan(potEcomp(0)).gt.0) then
                                       1

Error: Operands of comparison operator '.gt.' at (1) are LOGICAL(4)/INTEGER(4)
[ 66%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/PMFprocess.F.o
[ 67%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rmsnat.f.o
[ 67%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minimize_p.F.o
[ 67%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/TMscore.F.o
[ 67%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/oligomer.F.o
/.../source/source/unres/src-HCD-5D/minimize_p.F:202:28:

       common /przechowalnia/ Gcopy
                            1

[ 99%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new-sep_barrier.F.o
[ 99%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/gradient_p.F.o
[100%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cinfo.f.o
[100%] Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_NEWCORR.exe

gfortran: error: CMakeFiles/UNRES_BIN-MD-M.dir/MD_A-MTS.F.o: No such file or directory
[100%] Built target UNRES_BIN-MD-M

View Errors Summary


Build Warnings (21)
[ 16%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/chainbuild.F.o
[ 16%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/convert.f.o
[ 16%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/fitsq.f.o
[ 16%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/check_bond.f.o
[ 16%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/checkder_p.F.o
[ 17%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/.../source/source/cluster/unres/src/geomout.F:166:37:

   180 format (I5,F12.3,I2,8(1X,2I3,$))
                                     1

Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/unres/src/geomout.F:167:29:

   190 format (3X,11(1X,2I3,$))
                             1

Warning: $ should be the last specifier in format at (1)
[ 17%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/hc.f.o
[ 18%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/check_sc_distr.f.o
[ 18%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/compare_s1.F.o
[ 18%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/initialize.f.o
[ 18%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/contact.f.o
[ 19%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/intcor.f.o
[ 19%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/geomout.F.o
[ 19%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/main_clust.F.o
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:173:40:

   180 format (I5,2F12.3,I2,$,8(1X,2I3,$))
                                        1

Warning: $ should be the last specifier in format at (1)
/.../source/source/cluster/wham/src-HCD-5D/geomout.F:174:29:

   190 format (3X,11(1X,2I3,$))
                             1

Warning: $ should be the last specifier in format at (1)
[ 20%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/convert.f.o
[ 21%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/gnmr1.f.o
[ 21%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cored.f.o
[ 21%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/hc.f.o
[ 22%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/molread_zs.F.o
[ 23%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/matmult.f.o
[ 23%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/misc.f.o
[ 23%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/icant.f.o
[ 24%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/initialize_p.F.o
[ 24%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/noyes.f.o
Scanning dependencies of target UNRES_XDRF2PDB_BIN-M
[ 48%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/xdrf2pdb.F.o
[ 48%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/indexx.f.o
[ 48%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/geomout.F.o
[ 49%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readpdb.F.o
[ 50%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/initialize_p.F.o
/.../source/source/unres/src-HCD-5D/initialize_p.F:1324:28:

       common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6764568 vs 7290904 bytes)
/.../source/source/unres/src-HCD-5D/initialize_p.F:1414:28:

       common /przechowalnia/ iturn3_start_all(0:max_fg_procs),
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (6764568 vs 7290904 bytes)
[ 51%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/misc.f.o
[ 51%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/rescode.f.o
[ 52%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/nazwy.f.o
[ 52%] Linking Fortran executable ../../../bin/xdrf2pdb
[ 52%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/readrtns.F.o
[ 52%] Built target UNRES_XDRF2PDB_BIN-M
[ 53%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/rescode.f.o
[ 53%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/seq2chains.f.o
[ 53%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/setup_var.f.o
[ 54%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/chain_symmetry.F.o
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (348480000 vs 1569507016 bytes)
[ 67%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readrtns_compar.F.o
[ 68%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minim_jlee.F.o
[ 68%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minim_mcmf.F.o
[ 68%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/refsys.f.o
[ 69%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/readpdb.F.o
[ 70%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/misc.f.o
/.../source/source/wham/src-HCD-5D/readpdb.F:569:35:

             call sccenter(ires,iii,sccor)
                                   1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1) [-Wargument-mismatch]
/.../source/source/wham/src-HCD-5D/readpdb.F:591:43:

                 call sccenter(ires_old,iii,sccor)
                                           1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1) [-Wargument-mismatch]
/.../source/source/wham/src-HCD-5D/readpdb.F:723:31:

         call sccenter(ires,iii,sccor)
                               1

Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1) [-Wargument-mismatch]
[ 71%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/read_constr_homology.F.o
[ 71%] Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/cinfo.f.o
[ 71%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/moments.F.o
[ 71%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MP.F.o
[ 71%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/fitsq.f.o
[ 71%] Building C object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/proc_proc.c.o
[ 72%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/MREMD.F.o
[ 72%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/muca_md.F.o
[ 73%] Linking Fortran executable ../../../../bin/cluster_wham-mult_gfortran_MPI_NEWCORR.exe
/.../source/source/unres/src-HCD-5D/MREMD.F:1353:29:
        common /przechowalnia/ d_restart1,d_restart2
                             1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (324403200 vs 162250752 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:1762:28:

       common /przechowalnia/ d_restart1
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (162201600 vs 324403200 bytes)
/.../source/source/unres/src-HCD-5D/MREMD.F:1957:28:

       common /przechowalnia/ d_restart1
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (162201600 vs 324403200 bytes)
[ 73%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/contact.f.o
[ 73%] Built target UNRES_CLUSTER_WHAM_M_BIN
[ 74%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/elecont.f.o
[ 74%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/newconf.f.o
[ 74%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/contfunc.f.o
[ 75%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/parmread.F.o
[ 76%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/cont_frag.f.o
[ 76%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/.../source/source/wham/src-HCD-5D/conf_compar.F:378:24:

             write(istat,'(1x,$,20(i3,$))')
                        1

Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:381:25:

               write(istat,'(1x,$,20(f5.1,f5.2$))')
                         1

Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:384:25:

               write(istat,'(1x,$,20(f5.1$))')
                         1

Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:387:24:

             write(istat,'(1x,$,20(i1,$))')
                        1

Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-HCD-5D/conf_compar.F:393:27:

               write (istat,'(100(i1,$))')(iclass(k,j),
                           1

Warning: $ should be the last specifier in format at (1)
[ 76%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/match_contact.f.o
[ 77%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/angnorm.f.o
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[ 78%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/promienie.f.o
[ 78%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/permut.F.o
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[ 78%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/read_ref_str.F.o
[ 79%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/pinorm.f.o
[ 80%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/rmscalc.F.o
[ 80%] Building Fortran object source/wham/src-HCD-5D/CMakeFiles/UNRES_WHAM_M_BIN.dir/secondary.f.o
[ 86%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/rmdd.f.o
[ 87%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/rmsd.F.o
[ 87%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/sc_move.F.o
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/.../source/source/unres/src-HCD-5D/stochfric.F:536:28:

       common /przechowalnia/ ginvfric,Ghalf,fcopy
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (871226400 vs 348480000 bytes)
/.../source/source/unres/src-HCD-5D/stochfric.F:530:20:

       common /syfek/ gamvec
                    1

Warning: Named COMMON block 'syfek' at (1) shall be of the same size as elsewhere (52800 vs 158400 bytes)
[ 88%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/sumsld.f.o
[ 89%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/surfatom.f.o
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[ 90%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/timing.F.o
[ 90%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/together.F.o
[ 90%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/unres.F.o
[ 91%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/ssMD.F.o
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[ 92%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/econstrq-PMF.F.o
[ 93%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/chain_symmetry.F.o
[ 93%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/seq2chains.f.o
[ 93%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/iperm.f.o
[ 94%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/PMFprocess.F.o
[ 94%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/cart2intgrad.F.o
[ 95%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/lbfgs.F.o
/.../source/source/unres/src-HCD-5D/lbfgs.F:85:23:

       common /lbfgstat/ status,niter,ncalls
                       1

Warning: Padding of 3 bytes required before 'niter' in COMMON 'lbfgstat' at (1); reorder elements or use -fno-align-commons [-Walign-commons]
[ 95%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/search.f.o
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[ 97%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/contact_cp.F.o
[ 97%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/kinetic_CASC.F.o
[ 98%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/make_xx_list.F.o
[ 98%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/int_from_cart.F.o
[ 98%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new_barrier.F.o

View Warnings Summary


Test (11  passed, 19 failed, 0 not run)
 
View Tests Summary