Site Name: dell15 Build Name: devel Linux-gfortan-MPI-DFA E0LL2Y
(view notes)
Stamp: 20200321-2203-Nightly
(related builds)
Time: 2020-03-22T04:16:07 CET Type: Nightly
OS Name: Linux OS Platform: x86_64 OS Release: 3.13.0-153-generic OS Version: #203-Ubuntu SMP Thu Jun 14 08:52:28 UTC 2018 Compiler Version: unknown CTest version: ctest-2.8.12.2
Start Time: 2020-03-22T04:16:05 CET End Time: 2020-03-22T04:16:06 CET Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2020-03-22T04:16:06 CET End Time: 2020-03-22T04:16:06 CET Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/devel/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
[ 71%] Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/fitsq.f.o
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/.../source/source/unres/src_MD-M-SAXS-homology/minimize_p.F:424.28:
common /przechowalnia/ v
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (207850216 vs 46080000 bytes)
[ 73%] Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/contact.f.o
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Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/minim_jlee.F.o
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Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/.../source/source/wham/src-M-SAXS-homology/conf_compar.F:378.24:
write(istat,'(1x,$,20(i3,$))')
1
Warning: $ should be the last specifier in format at (1)
File: /tmp/cdash/devel/build/Warning: DO loop at
Line: 1
Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/mysort.f.o
[ 83%] [ 84%] Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/ssMD.F.o
Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/dfa.F.o
/.../source/source/wham/src-M-SAXS-homology/dfa.F:1732.15:
do i=1,0
1
Warning: DO loop at (1) will be executed zero times
/.../source/source/wham/src-M-SAXS-homology/dfa.F:1020.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (28800 vs 19200 bytes)
/.../source/source/wham/src-M-SAXS-homology/dfa.F:1021.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (11520024 vs 5120024 bytes)
/.../source/source/wham/src-M-SAXS-homology/dfa.F:1023.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (345600 vs 230400 bytes)
/.../source/source/wham/src-M-SAXS-homology/dfa.F:1022.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (28800 vs 19200 bytes)
[ 84%] [ 84%] Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/pinorm.f.o
Building Fortran object source/wham/src-M-SAXS-homology/CMakeFiles/UNRES_WHAM_M_BIN.dir/cinfo.f.o
[ 85%] [ 85%] Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/printmat.f.o
Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/prng_32.F.o
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Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/refsys.f.o
/.../source/source/unres/src_MD-M-SAXS-homology/readpdb.F:625.35:
call sccenter(ires,iii,sccor)
1
Warning: Actual argument contains too few elements for dummy argument 'sccor' (60/150) at (1)
File: /tmp/cdash/devel/build/Warning: DO loop at
Line: 1
Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/seq2chains.f.o
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Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new_barrier.F.o
[ 99%] Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new-sep_barrier.F.o
/.../source/source/unres/src_MD-M-SAXS-homology/dfa.F:1768.15:
do i=1,0
1
Warning: DO loop at (1) will be executed zero times
/.../source/source/unres/src_MD-M-SAXS-homology/dfa.F:1056.20:
common /sheca/ bx,by,bz
1
Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (28800 vs 19200 bytes)
/.../source/source/unres/src_MD-M-SAXS-homology/dfa.F:1057.19:
common /shee/ vbeta,vbet,vbetp,vbetm
1
Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (11520024 vs 5120024 bytes)
/.../source/source/unres/src_MD-M-SAXS-homology/dfa.F:1059.19:
common /shef/ shefx, shefy, shefz
1
Warning: Named COMMON block 'shef' at (1) shall be of the same size as elsewhere (345600 vs 230400 bytes)
/.../source/source/unres/src_MD-M-SAXS-homology/dfa.F:1058.20:
common /shetf/ shetfx,shetfy,shetfz
1
Warning: Named COMMON block 'shetf' at (1) shall be of the same size as elsewhere (28800 vs 19200 bytes)
[100%] Building Fortran object source/unres/src_MD-M-SAXS-homology/CMakeFiles/UNRES_BIN-MD-M.dir/gradient_p.F.o
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/.../source/source/unres/src_MD-M-SAXS-homology/energy_p_new_barrier.F:9207.28:
common /przechowalnia/ zapas
1
Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (172032000 vs 63897600 bytes)
Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_E0LL2Y_DFA.exe
[100%] Built target UNRES_BIN-MD-M