Site Name: dell15 Build Name: homology Linux-pgi-MPI E0LL2Y
(view notes)
Stamp: 20180406-2203-Nightly
(related builds)
Time: 2018-04-07T04:24:43 CEST Type: Nightly
OS Name: Linux OS Platform: x86_64 OS Release: 3.13.0-24-generic OS Version: #47-Ubuntu SMP Fri May 2 23:30:00 UTC 2014 Compiler Version: unknown CTest version: ctest-2.8.12.2
Start Time: 2018-04-07T04:24:33 CEST End Time: 2018-04-07T04:24:41 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2018-04-07T04:24:41 CEST End Time: 2018-04-07T04:24:41 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_WITH_MPI=1 -DUNRES_MPIRUN=1 -DCMAKE_Fortran_COMPILER=pgf90 "-GUnix Makefiles" "/tmp/cdash/homology/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is PGI
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /opt/pgi/linux86-64/17.4/bin/pgf90
-- Check for working Fortran compiler: /opt/pgi/linux86-64/17.4/bin/pgf90 -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /opt/pgi/linux86-64/17.4/bin/pgf90 supports Fortran 90
-- Checking whether /opt/pgi/linux86-64/17.4/bin/pgf90 supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/homology/build
Build command: /usr/bin/make -i -j4 Start Time: 2018-04-07T04:24:43 CEST End Time: 2018-04-07T04:26:01 CEST
0 inform, 1 warnings, 0 severes, 0 fatal for edfad
PGF90-W-0169-Multiple data initializations of common block rdfa (/.../source/source/cluster/wham/src/dfa.F)
0 inform, 1 warnings, 0 severes, 0 fatal for edfat
PGF90-W-0169-Multiple data initializations of common block rdfa (/.../source/source/cluster/wham/src/dfa.F)
0 inform, 1 warnings, 0 severes, 0 fatal for edfan
PGF90-W-0169-Multiple data initializations of common block rdfa (/.../source/source/cluster/wham/src/dfa.F)
0 inform, 1 warnings, 0 severes, 0 fatal for edfab
The following function(s) are called, but no IPA information is available:
initialize_, hpb_partition_, init_int_table_, homology_partition_, refsys_
Linking without IPA
/usr/bin/ld: cannot find CMakeFiles/UNRES_WHAM_M_BIN.dir/initialize_p.F.o: No such file or directory
child process exit status 1: /usr/bin/ld
[ 81%] Built target UNRES_WHAM_M_BIN
[ 82%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/printmat.f.o
Scanning dependencies of target UNRES_CLUSTER_BIN
[ 82%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/arcos.f.o
[ 82%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/isnan_pgi.f.o
[ 83%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/cartprint.f.o
[ 83%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/cinfo.f.o
[ 83%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/chainbuild.f.o
[ 83%] Building C object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/proc_proc.c.o