CDash : UNRES

Site Name: dell15
Build Name: Linux-gfortan-MPI GAB (view notes)
Stamp: 20170927-2203-Nightly (related builds)
Time: 2017-09-28T03:05:06 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-24-generic
OS Version: #47-Ubuntu SMP Fri May 2 23:30:00 UTC 2014
Compiler Version: unknown
CTest version: ctest-2.8.12.2

Current Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	0	50
Test	0	0

Previous Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	0	50
Test	0	0

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Stage: Update (0 errors, 0 warnings)

Start Time: 2017-09-28T03:05:01 CEST
End Time: 2017-09-28T03:05:04 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2017-09-28T03:05:04 CEST
End Time: 2017-09-28T03:05:04 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=GAB -DUNRES_CSA_FF=GAB -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/source"
Configure Return Value: 0
Configure Output:

-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
MPI_Fortran_INCLUDE_PATH
/users/local/mpich2-1.4.1p1_gnu/include -I/users/local/mpich2-1.4.1p1_gnu/include
MPI_Fortran_LIBRARIES
/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpich.so/users/local/mpich2-1.4.1p1_gnu/lib/libopa.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpl.so/usr/lib/x86_64-linux-gnu/librt.so/usr/lib/x86_64-linux-gnu/libpthread.so
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2017-09-28T03:05:06 CEST
End Time: 2017-09-28T03:05:54 CEST

View Errors Summary

Build Warnings (50)

Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/unres_min.F.o
[ 18%] [ 18%] [ 18%] [ 19%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/cored.f.o
Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/elecont.f.o
Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/energy_p_new_barrier.F.o
Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/cored.f.o
[ 19%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/dihed_cons.F.o
/tmp/cdash/source/source/unres/src_CSA/energy_p_new_barrier.F:6447.28:

      common /przechowalnia/ zapas                                      
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (43008000 vs 15974400 bytes)

[ 19%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/fitsq.f.o
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Scanning dependencies of target UNRES_BIN-MD-M
[ 19%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/add.f.o
[ 19%] [ 19%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/eigen.f.o
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[ 19%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/readpdb.F.o
[ 20%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/banach.f.o
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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1018.20:

      common /shetf/     shetfx,shetfy,shetfz                           
                    1

Warning: Actual argument contains too few elements for dummy argument 'wshet' (360000/640000) at (1)

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1016.20:

      common /sheca/     bx,by,bz                                       
                    1

Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (14400 vs 19200 bytes)

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1017.19:

      common /shee/      vbeta,vbet,vbetp,vbetm                         
                   1

Warning: Named COMMON block 'shee' at (1) shall be of the same size as elsewhere (2880024 vs 5120024 bytes)

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1019.19:

      common /shef/      shefx, shefy, shefz                            
                   1

Build Log line 85

File: /tmp/cdash/build/Warning: DO loop at Line: 1

[ 13%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/banach.f.o
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Linking Fortran executable ../../../../bin/cluster_unres_gfortran.exe
[ 13%] Built target UNRES_CLUSTER_BIN
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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1728.15:

       do i=1,0                                                         
               1

Warning: DO loop at (1) will be executed zero times

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1077.26:

      call sheetforce(nca,wshet)                                        
                          1

[  3%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/convert.f.o
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/tmp/cdash/source/source/cluster/unres/src/geomout.F:166.38:

  180 format (I5,2F12.3,I2,8(1X,2I3,$))                                 
                                      1

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/tmp/cdash/source/source/cluster/unres/src/geomout.F:167.29:

  190 format (3X,11(1X,2I3,$))                                          
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[  4%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/convert.f.o
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/tmp/cdash/source/source/unres/src_MIN/energy_p_new_barrier.F:6801.28:

      common /przechowalnia/ zapas                                      
                            1

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[ 21%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/elecont.f.o
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[ 24%] [ 25%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/cored.f.o
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      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
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/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:296.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
                            1

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/tmp/cdash/source/source/unres/src_MD/initialize_p.F: In function ‘init_int_table’:

Build Log line 201

File: source/unres/src_MD/initialize_p.F Line: 672

/tmp/cdash/source/source/unres/src_MD/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 204

File: source/unres/src_MD/initialize_p.F Line: 670

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/tmp/cdash/source/source/unres/src_CSA/initialize_p.F: In function ‘init_int_table’:

Build Log line 210

File: source/unres/src_CSA/initialize_p.F Line: 672

/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 213

File: source/unres/src_CSA/initialize_p.F Line: 670

/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:670:0: note: containing loop

         do i=0,maxprocs-1
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[ 27%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/diff12.f.o
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      common /langforc/ friction,stochforc,                             
                       1

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      common /gucio/ cm,energia_short                                   
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      common /gucio/ cm                                                 
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      common /gucio/ cm                                                 
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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F: In function ‘init_int_table’:

Build Log line 291

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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
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      common /langforc/ friction,stochforc,                             
                       1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1636.28:

      common /przechowalnia/ d_restart1                                 
                            1

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/tmp/cdash/source/source/unres/src_MD-M/MREMD.F:1823.28:

      common /przechowalnia/ d_restart1                                 
                            1

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Linking Fortran executable ../../../bin/unresCSA_gfortran_MPI_GAB.exe
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                            1

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/tmp/cdash/source/source/unres/src_MD/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

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      common /przechowalnia/ zapas                                      
                            1

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                        1

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/tmp/cdash/source/source/wham/src/conf_compar.F:352.25:

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                         1

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/tmp/cdash/source/source/wham/src/conf_compar.F:355.25:

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/tmp/cdash/source/source/wham/src/conf_compar.F:358.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

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/tmp/cdash/source/source/wham/src/conf_compar.F:364.27:

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                           1

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      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

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/tmp/cdash/source/source/unres/src_MD-M/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

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      common /przechowalnia/ zapas                                      
                            1

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/tmp/cdash/source/source/cluster/wham/src/geomout.F:167.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src/geomout.F:168.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

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/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:173.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/wham/src-M/geomout.F:174.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/geomout.F:190:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1

Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons

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COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/main_clust.F:448:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1

Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons

COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/main_clust.F:360:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
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Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons

COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/main_clust.F:20:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1

Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons

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/tmp/cdash/source/source/wham/src-M/conf_compar.F:370.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/wham/src-M/conf_compar.F:373.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1
Warning: $ should be the last specifier in format at (1)
/tmp/cdash/source/source/wham/src-M/conf_compar.F:376.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1
Warning: $ should be the last specifier in format at (1)
The maximum number of reported warnings or errors has been reached!!!

View Warnings Summary

Test (9 passed, 0 failed, 0 not run)

View Tests Summary