From: Dawid Jagiela Date: Sun, 26 Oct 2014 16:03:50 +0000 (+0100) Subject: switched to CMake FindMPI module in all source files that use MPI X-Git-Tag: v.3.2.1~24 X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?p=unres.git;a=commitdiff_plain;h=3a3ee5013eef26f00c82b6948724fd9c54accc15 switched to CMake FindMPI module in all source files that use MPI --- diff --git a/CMakeLists.txt b/CMakeLists.txt index b519d39..87cffd9 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -123,49 +123,12 @@ option(UNRES_NA_MMCE "Kompilujemy na mmmce?" OFF ) # Note for the future - use find package to get MPI find_package(MPI QUIET) -#if(MPI_LIBRARY) - -#MPI_INCLUDE_PATH - - -if(MPIF_LOCAL_DIR) - find_library(MPIF_LIBRARY NAMES libmpich.a NO_DEFAULT_PATH PATHS ${MPIF_LOCAL_DIR}/lib) - find_path( MPIF_INCLUDE_DIRECTORIES NAMES mpif.h NO_DEFAULT_PATH PATHS ${MPIF_LOCAL_DIR}/include ) -else(MPIF_LOCAL_DIR) - find_library(MPIF_LIBRARY NAMES mpi mpich PATHS - ${MPI_LIBRARY} - ${MPI_LIBRARY}/../ - ${MPI_EXTRA_LIBRARY} - /usr/lib - /usr/local/lib - /usr/local/mpi/lib - ) - find_path( MPIF_INCLUDE_DIRECTORIES NAMES mpif.h PATHS - ${MPI_INCLUDE_PATH} - /usr/include - /usr/local/include - /usr/include/mpi - /usr/local/mpi/include - ) -endif(MPIF_LOCAL_DIR) - -set( MPIF_LIBRARIES ${MPIF_LIBRARY}) - -if ( MPIF_INCLUDE_DIRECTORIES ) - set( MPIF_FOUND TRUE ) +if (MPI_Fortran_FOUND) message("MPI found") -else ( MPIF_INCLUDE_DIRECTORIES ) - set( MPIF_FOUND FALSE ) +else() message("MPI not found - disabling MPI compile flags ") set ( UNRES_WITH_MPI "OFF") -endif ( MPIF_INCLUDE_DIRECTORIES ) - -if (MPIF_FOUND) - message("MPIF_LIBRARIES=${MPIF_LIBRARY}") - message("MPIF_INCLUDE_DIRECTORIES=${MPIF_INCLUDE_DIRECTORIES}" ) -endif(MPIF_FOUND) - - +endif(MPI_Fortran_FOUND) #====================================== # Detect system architecture diff --git a/source/cluster/wham/src-M/CMakeLists.txt b/source/cluster/wham/src-M/CMakeLists.txt index 1e5d120..7642654 100644 --- a/source/cluster/wham/src-M/CMakeLists.txt +++ b/source/cluster/wham/src-M/CMakeLists.txt @@ -69,9 +69,11 @@ else () set(FFLAGS0 "-I. -I${CMAKE_CURRENT_SOURCE_DIR}/include_unres" ) endif (Fortran_COMPILER_NAME STREQUAL "ifort") +#========================================= # Add MPI compiler flags +#========================================= if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_CLUSTER_WHAM_M_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -168,9 +170,9 @@ set_target_properties(UNRES_CLUSTER_WHAM_M_BIN PROPERTIES OUTPUT_NAME ${UNRES_CL #========================================= # Link libraries #========================================= -# link MPI library (libmpich.a) +# link MPI libraries if(UNRES_WITH_MPI) - target_link_libraries( UNRES_CLUSTER_WHAM_M_BIN ${MPIF_LIBRARIES} ) + target_link_libraries( UNRES_CLUSTER_WHAM_M_BIN ${MPI_Fortran_LIBRARIES} ) endif(UNRES_WITH_MPI) # link libxdrf.a target_link_libraries( UNRES_CLUSTER_WHAM_M_BIN xdrf ) diff --git a/source/cluster/wham/src/CMakeLists.txt b/source/cluster/wham/src/CMakeLists.txt index fc35792..83e34ad 100644 --- a/source/cluster/wham/src/CMakeLists.txt +++ b/source/cluster/wham/src/CMakeLists.txt @@ -69,9 +69,11 @@ else () set(FFLAGS0 "-I. -I${CMAKE_CURRENT_SOURCE_DIR}/include_unres " ) endif (Fortran_COMPILER_NAME STREQUAL "ifort") +#========================================= # Add MPI compiler flags +#========================================= if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_CLUSTER_WHAM_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -173,9 +175,9 @@ set_target_properties(UNRES_CLUSTER_WHAM_BIN PROPERTIES OUTPUT_NAME ${UNRES_CLUS #========================================= # Link libraries #========================================= -# link MPI library (libmpich.a) +# link MPI libraries if(UNRES_WITH_MPI) - target_link_libraries( UNRES_CLUSTER_WHAM_BIN ${MPIF_LIBRARIES} ) + target_link_libraries( UNRES_CLUSTER_WHAM_BIN ${MPI_Fortran_LIBRARIES} ) endif(UNRES_WITH_MPI) # link libxdrf.a target_link_libraries( UNRES_CLUSTER_WHAM_BIN xdrf ) diff --git a/source/unres/src_CSA/CMakeLists.txt b/source/unres/src_CSA/CMakeLists.txt index ba229fc..445b8ac 100644 --- a/source/unres/src_CSA/CMakeLists.txt +++ b/source/unres/src_CSA/CMakeLists.txt @@ -119,10 +119,10 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS1 "${FFLAGS1} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS2 "${FFLAGS2} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS3 "${FFLAGS3} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS1 "${FFLAGS1} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS2 "${FFLAGS2} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS3 "${FFLAGS3} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_CSA_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -243,7 +243,7 @@ set_target_properties(UNRES_BIN-CSA PROPERTIES OUTPUT_NAME ${UNRES_BIN}) # Link libraries #========================================= # link MPI library (libmpich.a) -target_link_libraries( UNRES_BIN-CSA ${MPIF_LIBRARIES} ) +target_link_libraries( UNRES_BIN-CSA ${MPI_Fortran_LIBRARIES} ) # link libxdrf.a #target_link_libraries( ${UNRES_BIN} xdrf ) diff --git a/source/unres/src_CSA_DiL/CMakeLists.txt b/source/unres/src_CSA_DiL/CMakeLists.txt index d69490c..7f4f3ab 100644 --- a/source/unres/src_CSA_DiL/CMakeLists.txt +++ b/source/unres/src_CSA_DiL/CMakeLists.txt @@ -119,10 +119,10 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS1 "${FFLAGS1} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS2 "${FFLAGS2} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS3 "${FFLAGS3} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS1 "${FFLAGS1} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS2 "${FFLAGS2} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS3 "${FFLAGS3} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_CSA_DiL_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -240,15 +240,12 @@ add_executable(UNRES_BIN-CSA-DIL ${UNRES_CSA_DiL_SRCS} ) set_target_properties(UNRES_BIN-CSA-DIL PROPERTIES OUTPUT_NAME ${UNRES_BIN}) #set_property(TARGET ${UNRES_BIN} PROPERTY RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin/unres/MD ) -#add_dependencies (${UNRES_BIN} ${UNRES_XDRFLIB}) #========================================= # Link libraries #========================================= -# link MPI library (libmpich.a) -target_link_libraries( UNRES_BIN-CSA-DIL ${MPIF_LIBRARIES} ) -# link libxdrf.a -#target_link_libraries( ${UNRES_BIN} xdrf ) +# link MPI libraries +target_link_libraries( UNRES_BIN-CSA-DIL ${MPI_Fortran_LIBRARIES} ) #========================================= # TESTS diff --git a/source/unres/src_MD-M/CMakeLists.txt b/source/unres/src_MD-M/CMakeLists.txt index 84a5ab8..eed7732 100644 --- a/source/unres/src_MD-M/CMakeLists.txt +++ b/source/unres/src_MD-M/CMakeLists.txt @@ -176,10 +176,10 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS1 "${FFLAGS1} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS2 "${FFLAGS2} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS3 "${FFLAGS3} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS1 "${FFLAGS1} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS2 "${FFLAGS2} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS3 "${FFLAGS3} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_MDM_SRC0} APPEND PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -313,7 +313,7 @@ set_target_properties(UNRES_BIN-MD-M PROPERTIES OUTPUT_NAME ${UNRES_BIN}) #========================================= # link MPI library (libmpich.a) if(UNRES_WITH_MPI) - target_link_libraries( UNRES_BIN-MD-M ${MPIF_LIBRARIES} ) + target_link_libraries( UNRES_BIN-MD-M ${MPI_Fortran_LIBRARIES} ) endif(UNRES_WITH_MPI) # link libxdrf.a #message("UNRES_XDRFLIB=${UNRES_XDRFLIB}") diff --git a/source/unres/src_MD/CMakeLists.txt b/source/unres/src_MD/CMakeLists.txt index e2b4934..f0f1123 100644 --- a/source/unres/src_MD/CMakeLists.txt +++ b/source/unres/src_MD/CMakeLists.txt @@ -150,10 +150,10 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS1 "${FFLAGS1} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS2 "${FFLAGS2} -I${MPIF_INCLUDE_DIRECTORIES}") - set(FFLAGS3 "${FFLAGS3} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS1 "${FFLAGS1} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS2 "${FFLAGS2} -I${MPI_Fortran_INCLUDE_PATH}") + set(FFLAGS3 "${FFLAGS3} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_MD_SRC0} APPEND PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -281,7 +281,7 @@ set_target_properties(UNRES_BIN-MD PROPERTIES OUTPUT_NAME ${UNRES_BIN}) #========================================= # link MPI library (libmpich.a) if(UNRES_WITH_MPI) - target_link_libraries( UNRES_BIN-MD ${MPIF_LIBRARIES} ) + target_link_libraries( UNRES_BIN-MD ${MPI_Fortran_LIBRARIES} ) endif(UNRES_WITH_MPI) # link libxdrf.a #message("UNRES_XDRFLIB=${UNRES_XDRFLIB}") diff --git a/source/wham/src-M/CMakeLists.txt b/source/wham/src-M/CMakeLists.txt index e99035c..56347cf 100644 --- a/source/wham/src-M/CMakeLists.txt +++ b/source/wham/src-M/CMakeLists.txt @@ -108,7 +108,7 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags #========================================= if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_WHAM_M_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -228,7 +228,7 @@ set_target_properties(UNRES_WHAM_M_BIN PROPERTIES OUTPUT_NAME ${UNRES_WHAM_M_BIN # Link libraries #========================================= # link MPI library (libmpich.a) -target_link_libraries( UNRES_WHAM_M_BIN ${MPIF_LIBRARIES} ) +target_link_libraries( UNRES_WHAM_M_BIN ${MPI_Fortran_LIBRARIES} ) # link libxdrf.a target_link_libraries( UNRES_WHAM_M_BIN xdrf ) diff --git a/source/wham/src/CMakeLists.txt b/source/wham/src/CMakeLists.txt index d30f322..7f49fdb 100644 --- a/source/wham/src/CMakeLists.txt +++ b/source/wham/src/CMakeLists.txt @@ -106,7 +106,7 @@ endif (Fortran_COMPILER_NAME STREQUAL "ifort") # Add MPI compiler flags #========================================= if(UNRES_WITH_MPI) - set(FFLAGS0 "${FFLAGS0} -I${MPIF_INCLUDE_DIRECTORIES}") + set(FFLAGS0 "${FFLAGS0} -I${MPI_Fortran_INCLUDE_PATH}") endif(UNRES_WITH_MPI) set_property(SOURCE ${UNRES_WHAM_SRC0} PROPERTY COMPILE_FLAGS ${FFLAGS0} ) @@ -228,8 +228,8 @@ set_target_properties(UNRES_WHAM_BIN PROPERTIES OUTPUT_NAME ${UNRES_WHAM_BIN}) #========================================= # Link libraries #========================================= -# link MPI library (libmpich.a) -target_link_libraries( UNRES_WHAM_BIN ${MPIF_LIBRARIES} ) +# link MPI libraries +target_link_libraries( UNRES_WHAM_BIN ${MPI_Fortran_LIBRARIES} ) # link libxdrf.a target_link_libraries( UNRES_WHAM_BIN xdrf )