Added src_MD-M-newcorr (Adasko's source) and src-NEWSC of WHAM (with Momo's SCSC...
authorAdam Sieradzan <adasko@piasek4.chem.univ.gda.pl>
Tue, 15 Apr 2014 12:03:14 +0000 (14:03 +0200)
committerAdam Sieradzan <adasko@piasek4.chem.univ.gda.pl>
Tue, 15 Apr 2014 12:03:14 +0000 (14:03 +0200)
commite74a1da46f47c86b0c46679481b757c425642977
tree0724e6e740349682640dd07f6bb862cb04303326
parentd0bc9ab44e8f75f5cb92a01cda9daba97791e379
Added src_MD-M-newcorr (Adasko's source) and src-NEWSC of WHAM (with Momo's SCSC potentials)

Conflicts:

bin/unres/MD/unres_mchain-ifort_MPICH_GAB-NEWC.exe
source/wham/src-NEWSC/CMakeLists.txt
source/wham/src-NEWSC/COMMON.ALLPARM
source/wham/src-NEWSC/COMMON.CHAIN
source/wham/src-NEWSC/COMMON.COMPAR
source/wham/src-NEWSC/COMMON.CONTACTS1
source/wham/src-NEWSC/COMMON.CONTROL
source/wham/src-NEWSC/COMMON.CONTROL.org
source/wham/src-NEWSC/COMMON.ENEPS
source/wham/src-NEWSC/COMMON.ENERGIES
source/wham/src-NEWSC/COMMON.FREE
source/wham/src-NEWSC/COMMON.IOUNITS
source/wham/src-NEWSC/COMMON.MPI
source/wham/src-NEWSC/COMMON.OBCINKA
source/wham/src-NEWSC/COMMON.PEPTCONT
source/wham/src-NEWSC/COMMON.PROT
source/wham/src-NEWSC/COMMON.PROTFILES
source/wham/src-NEWSC/COMMON.VAR
source/wham/src-NEWSC/DIMENSIONS
source/wham/src-NEWSC/DIMENSIONS.COMPAR
source/wham/src-NEWSC/DIMENSIONS.FREE
source/wham/src-NEWSC/DIMENSIONS.FREE.old
source/wham/src-NEWSC/DIMENSIONS.ZSCOPT
source/wham/src-NEWSC/Makefile-pgi
source/wham/src-NEWSC/Makefile1_jump
source/wham/src-NEWSC/Makefile_MPICH_ifort
source/wham/src-NEWSC/Makefile_jubl
source/wham/src-NEWSC/Makefile_jump
source/wham/src-NEWSC/Makefile_matrix
source/wham/src-NEWSC/Makefile_matrix_PGI
source/wham/src-NEWSC/Makefile_matrix_PGI-SCT-oldparm
source/wham/src-NEWSC/Makefile_matrix_PGI-SCTF-oldparm
source/wham/src-NEWSC/Makefile_matrix_PGI-oldparm
source/wham/src-NEWSC/angnorm.f
source/wham/src-NEWSC/arcos.f
source/wham/src-NEWSC/bxread.F
source/wham/src-NEWSC/cartder.f
source/wham/src-NEWSC/cartprint.f
source/wham/src-NEWSC/chainbuild.F
source/wham/src-NEWSC/chainbuild.f
source/wham/src-NEWSC/conf_compar.F
source/wham/src-NEWSC/cont_frag.f
source/wham/src-NEWSC/contact.f
source/wham/src-NEWSC/contfunc.f
source/wham/src-NEWSC/cxread.F
source/wham/src-NEWSC/cxread.F.org
source/wham/src-NEWSC/define_pairs.f
source/wham/src-NEWSC/elecont.f
source/wham/src-NEWSC/enecalc1.F
source/wham/src-NEWSC/energy_p_new.F
source/wham/src-NEWSC/energy_p_new.F.org
source/wham/src-NEWSC/fitsq.f
source/wham/src-NEWSC/geomout.F
source/wham/src-NEWSC/gnmr1.f
source/wham/src-NEWSC/icant.f
source/wham/src-NEWSC/include_unres/COMMON.CALC
source/wham/src-NEWSC/include_unres/COMMON.CONTACTS
source/wham/src-NEWSC/include_unres/COMMON.CONTPAR
source/wham/src-NEWSC/include_unres/COMMON.DERIV
source/wham/src-NEWSC/include_unres/COMMON.FFIELD
source/wham/src-NEWSC/include_unres/COMMON.FRAG
source/wham/src-NEWSC/include_unres/COMMON.GEO
source/wham/src-NEWSC/include_unres/COMMON.HEADER
source/wham/src-NEWSC/include_unres/COMMON.INTERACT
source/wham/src-NEWSC/include_unres/COMMON.LOCAL
source/wham/src-NEWSC/include_unres/COMMON.MINIM
source/wham/src-NEWSC/include_unres/COMMON.NAMES
source/wham/src-NEWSC/include_unres/COMMON.SBRIDGE
source/wham/src-NEWSC/include_unres/COMMON.SCCOR
source/wham/src-NEWSC/include_unres/COMMON.SCROT
source/wham/src-NEWSC/include_unres/COMMON.TIME1
source/wham/src-NEWSC/include_unres/COMMON.TORCNSTR
source/wham/src-NEWSC/include_unres/COMMON.TORSION
source/wham/src-NEWSC/include_unres/COMMON.VAR
source/wham/src-NEWSC/include_unres/COMMON.VECTORS
source/wham/src-NEWSC/include_unres/COMMON.WEIGHTS
source/wham/src-NEWSC/initialize_p.F
source/wham/src-NEWSC/initialize_p.F.org
source/wham/src-NEWSC/int_from_cart.f
source/wham/src-NEWSC/intcor.f
source/wham/src-NEWSC/make_ensemble1.F
source/wham/src-NEWSC/match_contact.f
source/wham/src-NEWSC/misc.f
source/wham/src-NEWSC/molread_zs.F
source/wham/src-NEWSC/mygetenv.F
source/wham/src-NEWSC/mysort.f
source/wham/src-NEWSC/odlodc.f
source/wham/src-NEWSC/openunits.F
source/wham/src-NEWSC/parmread.F
source/wham/src-NEWSC/pinorm.f
source/wham/src-NEWSC/printmat.f
source/wham/src-NEWSC/proc_cont.f
source/wham/src-NEWSC/proc_proc.c
source/wham/src-NEWSC/promienie.f
source/wham/src-NEWSC/qwolynes.f
source/wham/src-NEWSC/read_ref_str.F
source/wham/src-NEWSC/readpdb.f
source/wham/src-NEWSC/readrtns.F
source/wham/src-NEWSC/readrtns.F.org
source/wham/src-NEWSC/readrtns_compar.F
source/wham/src-NEWSC/rescode.f
source/wham/src-NEWSC/rmscalc.f
source/wham/src-NEWSC/secondary.f
source/wham/src-NEWSC/setup_var.f
source/wham/src-NEWSC/slices.F
source/wham/src-NEWSC/store_parm.F
source/wham/src-NEWSC/timing.F
source/wham/src-NEWSC/wham_calc1.F
source/wham/src-NEWSC/wham_calc1.F.safe
source/wham/src-NEWSC/wham_multparm.F
source/wham/src-NEWSC/xdrf
source/wham/src-NEWSC/xread.F
242 files changed:
bin/unres/MD/unres_mchain-ifort_MPICH_GAB-NEWC.exe [new file with mode: 0755]
bin/unres/MD/unres_mchain_ifort_MPICH_E0LL2Y-NEWC.exe [new file with mode: 0755]
source/unres/src_MD-M-newcorr/BUGS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/CMakeLists.txt [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.BANK [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.BOUNDS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CACHE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CALC [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CHAIN [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CONTACTS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CONTACTS.moment [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CONTACTS_safe1 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CONTROL [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.CSA [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.DBASE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.DERIV [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.DERIV_safe [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.DISTFIT [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.FFIELD [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.GEO [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.HAIRPIN [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.HEADER [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.INFO [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.INTERACT [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.IOUNITS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.LANGEVIN [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.LANGEVIN.lang0 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.LANGEVIN.lang0_ [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.LOCAL [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.LOCMOVE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MAP [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MAXGRAD [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MCE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MCM [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MD [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MINIM [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.MUCA [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.NAMES [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.REMD [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.SBRIDGE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.SCCOR [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.SCROT [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.SETUP [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.SPLITELE [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.THREAD [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.TIME1 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.TORCNSTR [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.TORSION [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.VAR [new file with mode: 0644]
source/unres/src_MD-M-newcorr/COMMON.VECTORS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/DIMENSIONS [new file with mode: 0644]
source/unres/src_MD-M-newcorr/DIMENSIONS.2100 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/DIMENSIONS.4100 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/DIMENSIONS_safe1 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MD.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MD_A-MTS.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MD_A-MTS.F_safe [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MD_A-MTS.F_safe1 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MP.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MREMD.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MREMD.F.drabinka [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MREMD.F.safe [new file with mode: 0644]
source/unres/src_MD-M-newcorr/MREMD_nosy1traj.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile [new symlink]
source/unres/src_MD-M-newcorr/Makefile-biosim [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-intrepid-with-tau [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-matrix-intel [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-matrix3 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-matrix3-oldparm [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-oldparm [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-rstconv [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile-tau-temp [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile.tau-mpi-f77-pdt [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile.tau-mpi-pdt-pgi.org [new file with mode: 0755]
source/unres/src_MD-M-newcorr/Makefile_MPICH_ifort [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_aix_xlf [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_bigben [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_bigben-oldparm [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_bigben-tau [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_intrepid [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_jubl [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_jubl-debug [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_jubl-opt [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_jubl-opt-oldparm [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc10_em64 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc10_em64_galera [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc10_em64_galera-oldparm [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc10_em64_mpi2 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_ifc8 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_lnx_pgf90 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_osf_f90 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_win_ifl [new file with mode: 0644]
source/unres/src_MD-M-newcorr/Makefile_win_pgf90 [new file with mode: 0644]
source/unres/src_MD-M-newcorr/README [new file with mode: 0644]
source/unres/src_MD-M-newcorr/TAU [new file with mode: 0644]
source/unres/src_MD-M-newcorr/TAU_setup.sh [new file with mode: 0755]
source/unres/src_MD-M-newcorr/WVRND [new file with mode: 0644]
source/unres/src_MD-M-newcorr/add.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/arcos.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/banach.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/bank.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/big-sizes [new file with mode: 0644]
source/unres/src_MD-M-newcorr/bigsymbols-lang0.txt [new file with mode: 0644]
source/unres/src_MD-M-newcorr/blas.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/bond_move.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/brown_step.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/cartder.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/cartprint.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/chainbuild.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/change.awk [new file with mode: 0644]
source/unres/src_MD-M-newcorr/check_bond.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/check_sc_distr.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/check_sc_map.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/checkder_p.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/common.size [new file with mode: 0644]
source/unres/src_MD-M-newcorr/common.size.orig [new file with mode: 0644]
source/unres/src_MD-M-newcorr/compare_s1.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/compinfo.c [new file with mode: 0644]
source/unres/src_MD-M-newcorr/contact.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/convert.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/cored.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/csa.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/diff12.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/dihed_cons.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/distfit.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/djacob.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/econstr_local.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/ecorr_num.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/eelec.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/eigen.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/elecont.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_p_new-sep.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_p_new-sep_barrier.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_p_new.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_p_new_barrier.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_p_new_barrier.F.safe [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_split-sep.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/energy_split.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/entmcm.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/env.log [new file with mode: 0644]
source/unres/src_MD-M-newcorr/fitsq.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/gauss.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/gen_rand_conf.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/geomout.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/gnmr1.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/gradient_p.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/indexx.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/initialize_p.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/int_to_cart.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/intcartderiv.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/intcor.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/intlocal.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/kinetic_lesyng.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/lagrangian_lesyng.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/local_move.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/make-tau.log [new file with mode: 0644]
source/unres/src_MD-M-newcorr/map.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/matmult.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/mc.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/mcm.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/minim_jlee.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/minim_mcmf.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/minimize_p.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/misc.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/module.log [new file with mode: 0644]
source/unres/src_MD-M-newcorr/moments.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/muca_md.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/newconf.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/objects.sizes [new file with mode: 0644]
source/unres/src_MD-M-newcorr/parmread.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/pdtf5579.pdb [new file with mode: 0644]
source/unres/src_MD-M-newcorr/permut.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/pinorm.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/printmat.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/prng.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/prng_32.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/proc_proc.c [new file with mode: 0644]
source/unres/src_MD-M-newcorr/q_measure.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/q_measure1.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/q_measure3.F [new file with mode: 0644]
source/unres/src_MD-M-newcorr/ran.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/randgens.f [new file with mode: 0644]
source/unres/src_MD-M-newcorr/random_multi_chain/cont.unr [new file with mode: 0644]
source/unres/src_MD-M-newcorr/random_multi_chain/ext_mono.pdb [new file with mode: 0644]
source/unres/src_MD-M-newcorr/random_multi_chain/ext_sing.pdb [new file with mode: 0644]
source/unres/src_MD-M-newcorr/random_multi_chain/fort.4 [new file with mode: 0644]
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