CPPFLAGS = -DPROCOR -DLINUX -DUNRES -DMP -DMPI -DPGI -DISNAN \
           -DSPLITELE -DAMD64 -DLANG0 
#           -DCRYST_BOND -DCRYST_THETA -DCRYST_SC 
#-DCRYST_TOR
# -DPROCOR
#           -DTSCSC
#-DTIMING \
# -DCRYST_BOND -DCRYST_THETA -DCRYST_SC 
# -DMOMENT
#-DPARVEC 
#-DPARINT -DPARINTDER  

INSTALL_DIR = /users/software/mpich-1.2.7p1_intel-10.1_em64_ssh


FC= ifort

OPT =  -O3 -ip -w 

FFLAGS = -c ${OPT} -I$(INSTALL_DIR)/include 
FFLAGS1 = -c -w -g -d2 -CA -CB -I$(INSTALL_DIR)/include 
FFLAGS2 = -c -w -g -O0 -I$(INSTALL_DIR)/include  
FFLAGSE = -c -w -O3 -ipo -ipo_obj  -opt_report -I$(INSTALL_DIR)/include


BIN = ../bin/unres_Tc_procor_new_em64_nh_hremd_92110.exe
LIBS = -L$(INSTALL_DIR)/lib -lmpich xdrf_em64/libxdrf.a -lpthread 

ARCH = LINUX
PP = /lib/cpp -P


all: unres

.SUFFIXES: .F
.F.o:
	${FC} ${FFLAGS} ${CPPFLAGS} $*.F


object = unres.o arcos.o cartprint.o chainbuild.o convert.o initialize_p.o \
        matmult.o readrtns_CSA.o parmread.o gen_rand_conf.o printmat.o map.o \
        pinorm.o randgens.o rescode.o intcor.o timing.o misc.o intlocal.o \
        cartder.o checkder_p.o econstr_local.o energy_p_new_barrier.o \
	energy_p_new-sep_barrier.o gradient_p.o minimize_p.o sumsld.o \
        cored.o rmdd.o geomout.o readpdb.o regularize.o thread.o fitsq.o mcm.o \
        mc.o bond_move.o refsys.o check_sc_distr.o check_bond.o contact.o djacob.o \
        eigen.o blas.o add.o entmcm.o minim_mcmf.o \
        together.o csa.o minim_jlee.o shift.o diff12.o bank.o newconf.o ran.o \
        indexx.o MP.o compare_s1.o prng_32.o \
        test.o banach.o distfit.o rmsd.o elecont.o dihed_cons.o \
        sc_move.o local_move.o \
        intcartderiv.o lagrangian_lesyng.o\
	stochfric.o kinetic_lesyng.o MD_A-MTS.o moments.o int_to_cart.o \
        surfatom.o sort.o muca_md.o MREMD.o rattle.o gauss.o energy_split-sep.o \
        q_measure.o gnmr1.o

unres: ${object} 
	cc -o compinfo compinfo.c
	./compinfo | true
	${FC} ${FFLAGS} cinfo.f
	${FC} ${OPT} ${object} cinfo.o ${LIBS}  -o ${BIN}


clean:
	/bin/rm *.o *.il

newconf.o: newconf.f
	${FC} ${FFLAGS} ${CPPFLAGS} newconf.f

bank.o: bank.F
	${FC} ${FFLAGS} ${CPPFLAGS} bank.F

diff12.o: diff12.f
	${FC} ${FFLAGS} ${CPPFLAGS} diff12.f

csa.o: csa.f
	${FC} ${FFLAGS} ${CPPFLAGS} csa.f

shift.o: shift.F
	${FC} ${FFLAGS} ${CPPFLAGS} shift.F

ran.o: ran.f
	${FC} ${FFLAGS} ${CPPFLAGS} ran.f

together.o: together.F
	${FC} ${FFLAGS} ${CPPFLAGS} together.F

test.o: test.F
	${FC} ${FFLAGS} ${CPPFLAGS} test.F

chainbuild.o: chainbuild.F
	${FC} ${FFLAGS} ${CPPFLAGS} chainbuild.F

matmult.o: matmult.f
	${FC} ${FFLAGS} ${CPPFLAGS} matmult.f

parmread.o : parmread.F
	${FC} ${FFLAGS} ${CPPFLAGS} parmread.F

intcor.o : intcor.f
	${FC} ${FFLAGS} ${CPPFLAGS} intcor.f

cartder.o : cartder.F
	${FC} ${FFLAGS} ${CPPFLAGS} cartder.F

readpdb.o : readpdb.F
	${FC} ${FFLAGS2} ${CPPFLAGS} readpdb.F

sumsld.o : sumsld.f
	${FC} ${FFLAGS} ${CPPFLAGS} sumsld.f
        
cored.o : cored.f
	${FC} ${FFLAGS1} ${CPPFLAGS} cored.f
 
rmdd.o : rmdd.f
	${FC} ${FFLAGS} ${CPPFLAGS} rmdd.f

energy_p_new_barrier.o : energy_p_new_barrier.F
	${FC} ${FFLAGSE} ${CPPFLAGS} energy_p_new_barrier.F

gradient_p.o : gradient_p.F
	${FC} ${FFLAGSE} ${CPPFLAGS} gradient_p.F

energy_p_new-sep_barrier.o : energy_p_new-sep_barrier.F
	${FC} ${FFLAGSE} ${CPPFLAGS} energy_p_new-sep_barrier.F

lagrangian_lesyng.o : lagrangian_lesyng.F
	${FC} ${FFLAGSE} ${CPPFLAGS} lagrangian_lesyng.F

MD_A-MTS.o : MD_A-MTS.F
	${FC} ${FFLAGSE} ${CPPFLAGS} MD_A-MTS.F

blas.o : blas.f
	${FC} ${FFLAGS1} blas.f

add.o : add.f
	${FC} ${FFLAGS1} add.f

eigen.o : eigen.f
	${FC} ${FFLAGS2} eigen.f

proc_proc.o: proc_proc.c
	${CC} ${CFLAGS} proc_proc.c