INSTALL_DIR = /users/software/mpich-1.2.7p1_pgi_9.0_64bit_ssh
BIN=/users/adam/ZSCOREZ/bin
FC= pgf90
OPT = -mcmodel=medium -Mlarge_arrays -fast -pc 64 -tp amd64
#OPT = -mcmodel=medium -Mlarge_arrays -C -g -pc 64 -tp amd64
#OPT = -mcmodel=medium -Mlarge_arrays -pc 64 -tp amd64
OPT = -C -g 
FFLAGS =  ${OPT} -c -I. -I../src_MD_T-sccor/include_unres -I../src_MD_T-sccor -I/users/adam/MEY_MD/src_Tc-czarek -I$(INSTALL_DIR)/include
FFLAGS1 = ${FFLAGS}
FFLAGS2 = ${FFLAGS}
#FFLAGS1 = ${OPT} -g -c -I. -I../src_MD_T -I../src_MD -I/users/adam/MEY_MD/src -I$(INSTALL_DIR)/include
#FFLAGS2 = ${OPT1} -c -I. -I../src_MD_T -I../src_MD -I/users/adam/MEY_MD/src -I$(INSTALL_DIR)/include
CPPFLAGS = -DLINUX -DPGI -DSPLITELE -DPROCOR -DMP -DMPI
LIBS = -L$(INSTALL_DIR)/lib -lmpich -lpmpich -L../srcWHAM-Tsccor/xdrf -lxdrf

.c.o:
	cc -c -DLINUX -DPGI $*.c

.f.o:
	${FC} ${FFLAGS} $*.f

.F.o:
	${FC} ${FFLAGS} ${CPPFLAGS} ${FFLAGS} $*.F

objects = main_clust.o arcos.o cartprint.o chainbuild.o convert.o initialize_p.o \
	matmult.o readrtns.o pinorm.o rescode.o intcor.o timing.o misc.o \
	geomout.o readpdb.o read_coords.o parmread.o probabl.o fitsq.o hc.o  \
	track.o wrtclust.o srtclust.o noyes.o contact.o printmat.o \
	int_from_cart1.o energy_p_new.o icant.o proc_proc.o work_partition.o \
	setup_var.o read_ref_str.o

unres_clust: $(objects)
	$(FC) ${OPT} ${objects} ${LIBS} -o ${BIN}/unres_clustMD_MPI-new

clean:
	/bin/rm *.o

move:
	mv *.o ${OBJ}