INSTALL_DIR = /users/software/mpich-1.2.7p1_intel-10.1_em64_ssh
BIN=/users/adam/ZSCOREZ/bin
OUT=../bin
FC = ifort
#OPT = -O3 -ip -w
OPT = -CB -g 
FFLAGS =  ${OPT} -c -I. -I./include_unres -I$(INSTALL_DIR)/include
#CPPFLAGS = -DLINUX -DSPLITELE -DPROCOR -DCRYST_BOND -DCRYST_THETA -DCRYST_SC -DMPI -DUNRES
CPPFLAGS = -DLINUX -DPGI -DSPLITELE -DPROCOR -DCRYST_BOND -DCRYST_THETA -DCRYST_SC -DMP -DMPI
LIBS = -L$(INSTALL_DIR)/lib -lmpich /users/adam/ZSCOREZ/srcWHAM-Tsccor/xdrf/libxdrf.a 

.c.o:
	cc -c -DLINUX -DPGI $*.c

.f.o:
	${FC} ${FFLAGS} $*.f

.F.o:
	${FC} ${FFLAGS} ${CPPFLAGS} ${FFLAGS} $*.F

objects = main_clust.o arcos.o cartprint.o chainbuild.o convert.o initialize_p.o \
	matmult.o readrtns.o pinorm.o rescode.o intcor.o timing.o misc.o \
	geomout.o readpdb.o read_coords.o parmread.o probabl.o fitsq.o hc.o  \
	track.o wrtclust.o srtclust.o noyes.o contact.o printmat.o \
	int_from_cart1.o energy_p_new.o icant.o proc_proc.o work_partition.o \
	setup_var.o read_ref_str.o gnmr1.o permut.o

unres_clust: $(objects)
	$(FC) ${OPT} ${objects} ${LIBS} -o ${OUT}/unres_clustMD_MPI-D-oldparm

clean:
	/bin/rm *.o

move:
	mv *.o ${OBJ}