From 79626553b2efd1b793f1786831988fa07fd0740f Mon Sep 17 00:00:00 2001 From: Cezary Czaplewski Date: Tue, 12 Sep 2017 22:31:11 +0200 Subject: [PATCH] dissulfides in md movie and putty --- files/fluct.py | 1 + files/movie.pml | 1 + 2 files changed, 2 insertions(+) diff --git a/files/fluct.py b/files/fluct.py index 760edae..6865492 100644 --- a/files/fluct.py +++ b/files/fluct.py @@ -21,6 +21,7 @@ for line in inFile.readlines(): cmd.show_as("cartoon",mol) cmd.cartoon("putty", mol) +cmd.show("sticks","(cys/ca+cb+sg) and byres (cys/sg and bound_to cys/sg)") cmd.set("cartoon_putty_scale_min", min(bfacts),obj) cmd.set("cartoon_putty_scale_max", max(bfacts),obj) cmd.set("cartoon_putty_transform", 7,obj) diff --git a/files/movie.pml b/files/movie.pml index 0039b2e..a0dc731 100644 --- a/files/movie.pml +++ b/files/movie.pml @@ -5,6 +5,7 @@ load file_MD000.pdb,md smooth md,2,2 hide all show stick, md and name CA +show sticks,(CYS/CA+CB) and byres (CYS/CB and bound_to CYS/CB) bg_color white spectrum count,rainbow,md -- 1.7.9.5