unres.git
12 years agoeven more verbose swaping log
Dawid Jagiela [Thu, 29 Mar 2012 13:45:04 +0000 (15:45 +0200)]
even more verbose swaping log

12 years agomore verbose swaping in bank
Dawid Jagiela [Thu, 29 Mar 2012 12:23:00 +0000 (14:23 +0200)]
more verbose swaping in bank

12 years agocsacutoff fix
Dawid Jagiela [Wed, 14 Mar 2012 11:05:53 +0000 (12:05 +0100)]
csacutoff fix

12 years ago1) csacutoff log write fix 2) matrix input-template corrections
Dawid Jagiela [Tue, 13 Mar 2012 13:41:44 +0000 (09:41 -0400)]
1) csacutoff log write fix 2) matrix input-template corrections

12 years agoMerge branch 'feature-ga' of mmka.chem.univ.gda.pl:unres into feature-ga
Dawid Jagiela [Mon, 12 Mar 2012 12:31:52 +0000 (08:31 -0400)]
Merge branch 'feature-ga' of mmka.chem.univ.gda.pl:unres into feature-ga

12 years agomodified Makefile for testing single peptide runs
Dawid Jagiela [Mon, 12 Mar 2012 12:30:13 +0000 (08:30 -0400)]
modified Makefile for testing single peptide runs

12 years agoMerge branch 'feature-ga' of mmka:unres into feature-ga
Dawid Jagiela [Mon, 12 Mar 2012 12:20:25 +0000 (13:20 +0100)]
Merge branch 'feature-ga' of mmka:unres into feature-ga

12 years agocsacutoff is now calculated from avrage distance (avrd) between individuals in first...
Dawid Jagiela [Mon, 12 Mar 2012 12:12:06 +0000 (13:12 +0100)]
csacutoff is now calculated from avrage distance (avrd) between individuals in first bank. Border values are taken as a factor off this value. Factors are read from main input (minco,maxco).

12 years ago1) code cleanup 2) added CalcAvgDist function
Dawid Jagiela [Fri, 9 Mar 2012 13:58:22 +0000 (14:58 +0100)]
1) code cleanup 2) added CalcAvgDist function

12 years ago- added input files for 2 peptides (1LE1, 1LY2) runs on matrix
Dawid Jagiela [Wed, 7 Mar 2012 14:18:32 +0000 (09:18 -0500)]
- added input files for 2 peptides (1LE1, 1LY2) runs on matrix
- minor changes in makefile and test script

12 years agolinear csacutoff fix
Dawid Jagiela [Wed, 7 Mar 2012 12:02:31 +0000 (13:02 +0100)]
linear csacutoff fix

12 years agoextended scope of search in GetNBest function
Dawid Jagiela [Wed, 7 Mar 2012 11:15:16 +0000 (12:15 +0100)]
extended scope of search in GetNBest function

12 years ago modified: GA.f
Dawid Jagiela [Wed, 7 Mar 2012 10:52:19 +0000 (11:52 +0100)]
modified:   GA.f

12 years agoadded Genetic Algorythm code in branch feature-ga
Dawid Jagiela [Tue, 28 Feb 2012 13:35:40 +0000 (14:35 +0100)]
added Genetic Algorythm code in branch feature-ga

12 years agoadded source code v.3.0
Dawid Jagieła [Sat, 25 Feb 2012 12:55:23 +0000 (13:55 +0100)]
added source code