rm ave
/users2/local/pymol_1.6/pymol -c ../files/model.pml
-/big/appl/bin/tmscore MODEL1.pdb plik.pdb > tmscore1.out
-/big/appl/bin/tmscore MODEL2.pdb plik.pdb > tmscore2.out
-/big/appl/bin/tmscore MODEL3.pdb plik.pdb > tmscore3.out
-/big/appl/bin/tmscore MODEL4.pdb plik.pdb > tmscore4.out
-/big/appl/bin/tmscore MODEL5.pdb plik.pdb > tmscore5.out
+/users2/local/bin/tmscore MODEL1.pdb plik.pdb > tmscore1.out
+/users2/local/bin/tmscore MODEL2.pdb plik.pdb > tmscore2.out
+/users2/local/bin/tmscore MODEL3.pdb plik.pdb > tmscore3.out
+/users2/local/bin/tmscore MODEL4.pdb plik.pdb > tmscore4.out
+/users2/local/bin/tmscore MODEL5.pdb plik.pdb > tmscore5.out
#END
touch finished