-
-Plots of histograms of UNRES energy for each temperature, and
-energy vs temperature are presented.
-The weighted histogram analysis (WHAM) is applied to compute the
+<p>
+After a (M)REMD run is accomplished, a table showing replica-exchange statistics
+(a), plots of histograms of UNRES energy for each temperature (b), a plot of
+energy vs. temperature (c), a temperature-colored scatter plot of energy vs. RMSD
+(d), and the temperature-colored cumulative plot of rmsd vs. step number for all replicas
+(e), and a cumulative plot of walk of the replicas in temperature space (f) are
+displayed. The colors corresponding to replica temperatures are shown in panel (c),
+while different replicas are colored from black to yellow in panel (f).
+<p>
+<a href="static/remd1.png"><img src="static/remd1.png" width="300px"></a>(a)
+<a href="static/remd2.png"><img src="static/remd2.png" width="300px"></a>(b)
+<a href="static/remd3.png"><img src="static/remd3.png" width="300px"></a>(c)
+<a href="static/remd6.png"><img src="static/remd6.png" width="300px"></a>(d)
+<a href="static/remd7.png"><img src="static/remd7.png" width="300px"></a>(e)
+<a href="static/remd8.png"><img src="static/remd8.png" width="300px"></a>(f)
+<p>
+The weighted histogram analysis method (WHAM) is applied to compute the