X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Fwham%2Fsrc-M%2Fenergy_p_new.F;h=a0b80a5c10d6f3107e4996bb45ec7831ed42ee0c;hb=91c00cbda6c048a29c1f84fb7b361a5fd6b691f3;hp=d0775ad59a4757f78d1b93711e556f2d8860cc92;hpb=7006db11d703450fb82ce20cfc53f74614334362;p=unres.git

diff --git a/source/wham/src-M/energy_p_new.F b/source/wham/src-M/energy_p_new.F
index d0775ad..a0b80a5 100644
--- a/source/wham/src-M/energy_p_new.F
+++ b/source/wham/src-M/energy_p_new.F
@@ -2019,12 +2019,12 @@ cd      write (iout,*) 'iatel_s=',iatel_s,' iatel_e=',iatel_e
         gcorr_loc(i)=0.0d0
       enddo
       do i=iatel_s,iatel_e
-           if (i.le.1) cycle
+cAna           if (i.le.1) cycle
            if (itype(i).eq.ntyp1.or. itype(i+1).eq.ntyp1
-     &  .or. ((i+2).gt.nres)
-     &  .or. ((i-1).le.0)
-     &  .or. itype(i+2).eq.ntyp1
-     &  .or. itype(i-1).eq.ntyp1
+cAna     &  .or. ((i+2).gt.nres)
+cAna     &  .or. ((i-1).le.0)
+cAna     &  .or. itype(i+2).eq.ntyp1
+cAna     &  .or. itype(i-1).eq.ntyp1
      &) cycle
 C         endif
         if (itel(i).eq.0) goto 1215
@@ -2046,12 +2046,12 @@ C         endif
         num_conti=0
 C        write (iout,*) 'i',i,' ielstart',ielstart(i),' ielend',ielend(i)
         do j=ielstart(i),ielend(i)
-          if (j.le.1) cycle
+cAna          if (j.le.1) cycle
           if (itype(j).eq.ntyp1 .or. itype(j+1).eq.ntyp1
-     & .or.((j+2).gt.nres)
-     & .or.((j-1).le.0)
-     & .or.itype(j+2).eq.ntyp1
-     & .or.itype(j-1).eq.ntyp1
+cAna     & .or.((j+2).gt.nres)
+cAna     & .or.((j-1).le.0)
+cAna     & .or.itype(j+2).eq.ntyp1
+cAna     & .or.itype(j-1).eq.ntyp1
      &) cycle
           if (itel(j).eq.0) goto 1216
           ind=ind+1
@@ -3673,7 +3673,7 @@ c      write (iout,*) idihconstr_start_homo,idihconstr_end_homo
       do i=idihconstr_start_homo,idihconstr_end_homo
         kat2=0.0d0
 c        betai=beta(i,i+1,i+2,i+3)
-        betai = phi(i+3)
+        betai = phi(i)
 c       write (iout,*) "betai =",betai
         do k=1,constr_homology
           dih_diff(k)=pinorm(dih(k,i)-betai)
@@ -4172,7 +4172,7 @@ c     write (*,'(a,i2)') 'EBEND ICG=',icg
 c      write (iout,*) ithet_start,ithet_end
       do i=ithet_start,ithet_end
 C        if (itype(i-1).eq.ntyp1) cycle
-        if (i.le.2) cycle
+c        if (i.le.2) cycle
         if ((itype(i-1).eq.ntyp1).or.itype(i-2).eq.ntyp1
      &  .or.itype(i).eq.ntyp1) cycle
 C Zero the energy function and its derivative at 0 or pi.
@@ -4195,7 +4195,7 @@ C Zero the energy function and its derivative at 0 or pi.
           y(2)=0.0D0
           else
 
-        if (i.gt.3 .and. itype(i-3).ne.ntyp1) then
+        if (i.gt.3 .and. itype(max0(i-3,1)).ne.ntyp1) then
 #ifdef OSF
           phii=phi(i)
 c          icrc=0
@@ -4456,7 +4456,7 @@ C
       etheta=0.0D0
 c      write (iout,*) "ithetyp",(ithetyp(i),i=1,ntyp1)
       do i=ithet_start,ithet_end
-        if (i.eq.2) cycle
+c        if (i.eq.2) cycle
 c        print *,i,itype(i-1),itype(i),itype(i-2)
         if ((itype(i-1).eq.ntyp1).or.(itype(i-2).eq.ntyp1)
      &  .or.(itype(i).eq.ntyp1)) cycle
@@ -4473,7 +4473,7 @@ C In current verion the ALL DUMMY ATOM POTENTIALS ARE OFF
           coskt(k)=dcos(k*theti2)
           sinkt(k)=dsin(k*theti2)
         enddo
-        if (i.gt.3 .and. itype(i-3).ne.ntyp1) then
+        if (i.gt.3 .and. itype(max0(i-3,1)).ne.ntyp1) then
 #ifdef OSF
           phii=phi(i)
           if (phii.ne.phii) phii=150.0
@@ -4487,7 +4487,7 @@ C In current verion the ALL DUMMY ATOM POTENTIALS ARE OFF
           enddo
         else
           phii=0.0d0
-          ityp1=nthetyp+1
+          ityp1=ithetyp(itype(i-2))
           do k=1,nsingle
             cosph1(k)=0.0d0
             sinph1(k)=0.0d0
@@ -4508,7 +4508,7 @@ C In current verion the ALL DUMMY ATOM POTENTIALS ARE OFF
           enddo
         else
           phii1=0.0d0
-          ityp3=nthetyp+1
+          ityp3=ithetyp(itype(i))
           do k=1,nsingle
             cosph2(k)=0.0d0
             sinph2(k)=0.0d0