X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Funres%2Fsrc_MD-NEWSC%2FDIMENSIONS;fp=source%2Funres%2Fsrc_MD-NEWSC%2FDIMENSIONS;h=5151ff79a3cefb3195c3fc8d4c19d3040c185b75;hb=d101c97dea752458d76055fdbae49c26fff03c1f;hp=0000000000000000000000000000000000000000;hpb=325eda160c9ad2982501e091ca40606a29043712;p=unres.git diff --git a/source/unres/src_MD-NEWSC/DIMENSIONS b/source/unres/src_MD-NEWSC/DIMENSIONS new file mode 100644 index 0000000..5151ff7 --- /dev/null +++ b/source/unres/src_MD-NEWSC/DIMENSIONS @@ -0,0 +1,139 @@ +******************************************************************************** +* Settings for the program of united-residue peptide simulation in real space * +* * +* ------- As of 6/23/01 ----------- * +* * +******************************************************************************** +C Max. number of processors. + integer maxprocs + parameter (maxprocs=2048) +C Max. number of fine-grain processors + integer max_fg_procs +c parameter (max_fg_procs=maxprocs) + parameter (max_fg_procs=512) +C Max. number of coarse-grain processors + integer max_cg_procs + parameter (max_cg_procs=maxprocs) +C Max. number of AA residues + integer maxres + parameter (maxres=800) +C Appr. max. number of interaction sites + integer maxres2,maxres6,mmaxres2 + parameter (maxres2=2*maxres,maxres6=6*maxres) + parameter (mmaxres2=(maxres2*(maxres2+1)/2)) +C Max. number of variables + integer maxvar + parameter (maxvar=6*maxres) +C Max. number of groups of interactions that a given SC is involved in + integer maxint_gr + parameter (maxint_gr=2) +C Max. number of derivatives of virtual-bond and side-chain vectors in theta +C or phi. + integer maxdim + parameter (maxdim=(maxres-1)*(maxres-2)/2) +C Max. number of SC contacts + integer maxcont + parameter (maxcont=12*maxres) +C Max. number of contacts per residue + integer maxconts + parameter (maxconts=maxres/4) +c parameter (maxconts=50) +C Number of AA types (at present only natural AA's will be handled + integer ntyp,ntyp1 + parameter (ntyp=20,ntyp1=ntyp+1) +C Max. number of types of dihedral angles & multiplicity of torsional barriers +C and the number of terms in double torsionals + integer maxtor,maxterm,maxlor,maxtermd_1,maxtermd_2 + parameter (maxtor=4,maxterm=10,maxlor=3,maxtermd_1=8,maxtermd_2=8) +C Max. number of residue types and parameters in expressions for +C virtual-bond angle bending potentials + integer maxthetyp,maxthetyp1,maxtheterm,maxtheterm2,maxtheterm3, + & maxsingle,maxdouble,mmaxtheterm + parameter (maxthetyp=3,maxthetyp1=maxthetyp+1,maxtheterm=20, + & maxtheterm2=6,maxtheterm3=4,maxsingle=6,maxdouble=4, + & mmaxtheterm=maxtheterm) +c Max number of torsional terms in SCCOR + integer maxterm_sccor + parameter (maxterm_sccor=6) +C Max. number of lobes in SC distribution + integer maxlob + parameter (maxlob=4) +C Max. number of S-S bridges + integer maxss + parameter (maxss=20) +C Max. number of dihedral angle constraints + integer maxdih_constr + parameter (maxdih_constr=maxres) +C Max. number of patterns in the pattern database + integer maxseq + parameter (maxseq=10) +C Max. number of residues in a peptide in the database + integer maxres_base + parameter (maxres_base=10) +C Max. number of threading attempts + integer maxthread + parameter (maxthread=20) +C Max. number of move types in MCM + integer maxmovetype + parameter (maxmovetype=4) +C Max. number of stored confs. in MC/MCM simulation + integer maxsave + parameter (maxsave=20) +C Max. number of energy intervals + integer max_ene + parameter (max_ene=10) +C Max. number of conformations in Master's cache array + integer max_cache + parameter (max_cache=10) +C Max. number of conformations in the pool + integer max_pool + parameter (max_pool=10) +C Number of energy components + integer n_ene,n_ene2 + parameter (n_ene=23,n_ene2=2*n_ene) +C Number of threads in deformation + integer max_thread,max_thread2 + parameter (max_thread=4,max_thread2=2*max_thread) +C Number of structures to compare at t=0 + integer max_threadss,max_threadss2 + parameter (max_threadss=8,max_threadss2=2*max_threadss) +C Maxmimum number of angles per residue + integer mxang + parameter (mxang=4) +C Maximum number of groups of angles + integer mxgr + parameter (mxgr=2*maxres) +C Maximum number of chains + integer mxch + parameter (mxch=1) +csaC Maximum number of generated conformations +csa integer mxio +csa parameter (mxio=2) +csaC Maximum number of n7 generated conformations +csa integer mxio2 +csa parameter (mxio2=2) +csaC Maximum number of moves (n1-n8) +csa integer mxmv +csa parameter (mxmv=18) +csaC Maximum number of seed +csa integer max_seed +csa parameter (max_seed=1) +C Maximum number of timesteps for which stochastic MD matrices can be stored + integer maxflag_stoch + parameter (maxflag_stoch=0) +C Maximum number of backbone fragments in restraining + integer maxfrag_back + parameter (maxfrag_back=4) +C Maximum number of SC local term fitting function coefficiants + integer maxsccoef + parameter (maxsccoef=65) +C Maximum number of terms in SC bond-stretching potential + integer maxbondterm + parameter (maxbondterm=3) +C Maximum number of conformation stored in cache on each CPU before sending +C to master; depends on nstex / ntwx ratio + integer max_cache_traj + parameter (max_cache_traj=10) +C Nose-Hoover chain - chain length and order of Yoshida algorithm + integer maxmnh,maxyosh + parameter(maxmnh=10,maxyosh=5)