X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Funres%2Fsrc_MD-M%2FCOMMON.CHAIN;h=372fa85b9f9986351f671a10ea9e25ef189cb793;hb=14b55af23c7da34bfdc10f315551c8e01a3a906a;hp=6fb7b6fa43aa5925a3194e4a2038cd97380e7527;hpb=d7d33ac73e7386cf74bb07da09b67fa6619a0b11;p=unres.git

diff --git a/source/unres/src_MD-M/COMMON.CHAIN b/source/unres/src_MD-M/COMMON.CHAIN
index 6fb7b6f..372fa85 100644
--- a/source/unres/src_MD-M/COMMON.CHAIN
+++ b/source/unres/src_MD-M/COMMON.CHAIN
@@ -1,7 +1,9 @@
       integer nres,nsup,nstart_sup,nz_start,nz_end,iz_sc,
-     &  nres0,nstart_seq,chain_length,iprzes,tabperm,nperm
+     &  nres0,nstart_seq,chain_length,iprzes,tabperm,nperm,afmend,
+     &  afmbeg
       double precision c,dc,dc_old,d_c_work,xloc,xrot,dc_norm,t,r,
-     & prod,rt,dc_work,cref,crefjlee,chain_rep,dc_norm2
+     & prod,rt,dc_work,cref,crefjlee,chain_rep,dc_norm2,velAFMconst,
+     & totTafm
       common /chain/ c(3,maxres2+2),dc(3,0:maxres2),dc_old(3,0:maxres2),
      & xloc(3,maxres),xrot(3,maxres),dc_norm(3,0:maxres2),
      & dc_norm2(3,0:maxres2),
@@ -16,7 +18,14 @@
       common /from_zscore/ nz_start,nz_end,iz_sc
       double precision boxxsize,boxysize,boxzsize,enecut,sscut,
      & sss,sssgrad,
-     & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick
+     & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick,
+     & tubecenter,tubeR0,
+     & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick     
       common /box/  boxxsize,boxysize,boxzsize,enecut,sscut,sss,sssgrad,
      & buflipbot, bufliptop,bordlipbot,bordliptop,lipbufthick,lipthick
+      common /afm/  forceAFMconst, distafminit,afmend,afmbeg,
+     & velAFMconst,
+     & totTafm
+      common /tube/ tubecenter(3),tubeR0,
+     & buftubebot, buftubetop,bordtubebot,bordtubetop,tubebufthick