X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Funres%2Fsrc-HCD-5D%2Flagrangian_lesyng.F;h=6dd113bce3c6c6f3c7ef75f2deee4b2040c37d59;hb=43dfdc33f5b338546258b5a882326f97a76b5bd4;hp=11806459d9dbbe6e14e11bfb54794d9e45a68c34;hpb=68aa1d135805a14583695611acfcf637748b4466;p=unres.git diff --git a/source/unres/src-HCD-5D/lagrangian_lesyng.F b/source/unres/src-HCD-5D/lagrangian_lesyng.F index 1180645..6dd113b 100644 --- a/source/unres/src-HCD-5D/lagrangian_lesyng.F +++ b/source/unres/src-HCD-5D/lagrangian_lesyng.F @@ -8,7 +8,7 @@ c------------------------------------------------------------------------- include 'DIMENSIONS' #ifdef MPI include 'mpif.h' - integer time00 + double precision time00 #endif include 'COMMON.VAR' include 'COMMON.CHAIN' @@ -55,7 +55,7 @@ c------------------------------------------------------------------------- #endif #ifdef FIVEDIAG call grad_transform - d_a=0.0d0 + d_a(:,:2*nres)=0.0d0 if (lprn) then write (iout,*) "Potential forces backbone" do i=1,nres @@ -459,9 +459,9 @@ c write (iout,*) "i",i," itype",itype(i),ntyp1 endif enddo enddo - DMorig=DM - DU1orig=DU1 - DU2orig=DU2 + DMorig(:2*nres)=DM(:2*nres) + DU1orig(:2*nres)=DU1(:2*nres) + DU2orig(:2*nres)=DU2(:2*nres) if (gmatout) then write (iout,*)"The upper part of the five-diagonal inertia matrix" endif @@ -886,6 +886,9 @@ c--------------------------------------------------------------------------- c--------------------------------------------------------------------------- subroutine fivediaginv_mult(ndim,forces,d_a_vec) implicit none +#ifdef MPI + include 'mpif.h' +#endif include 'DIMENSIONS' include 'COMMON.CHAIN' include 'COMMON.IOUNITS' @@ -896,7 +899,12 @@ c--------------------------------------------------------------------------- double precision forces(3*ndim),accel(3,0:maxres2),rs(ndim), & xsolv(ndim),d_a_vec(6*nres) integer i,j,ind,ichain,n,iposc,innt,inct,inct_prev - accel=0.0d0 +#ifdef TIMING + include 'COMMON.TIME1' + double precision time01 + time01=MPI_Wtime() +#endif + accel(:,:2*nres)=0.0d0 do j=1,3 Compute accelerations in Calpha and SC do ichain=1,nchain @@ -996,6 +1004,9 @@ C Convert d_a to virtual-bon-vector basis ind=ind+3 endif enddo +#ifdef TIMING + time_ginvmult=time_ginvmult+MPI_Wtime()-time01 +#endif #ifdef DEBUG write (iout,*) "d_a_vec" write (iout,'(3f10.5)') (d_a_vec(j),j=1,3*(nct-nnt+nside))