X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Funres%2Fsrc-HCD-5D%2FCOMMON.CONTROL;h=da8581a3431969ff40a7761897f419846ef6be5e;hb=a30bd29e64da2aa47b84963fdd0bf4192ead2738;hp=0a21e09b145fe1a666472b4895b885e38a09e0f8;hpb=020e579626d686ec20ecd9f0cc4c8313f474e152;p=unres.git

diff --git a/source/unres/src-HCD-5D/COMMON.CONTROL b/source/unres/src-HCD-5D/COMMON.CONTROL
index 0a21e09..da8581a 100644
--- a/source/unres/src-HCD-5D/COMMON.CONTROL
+++ b/source/unres/src-HCD-5D/COMMON.CONTROL
@@ -1,32 +1,25 @@
+! This common block contains general variables controlling the calculations
+! and output level.
+!... energy_dec = .true. means print energy decomposition matrix
       integer modecalc,iscode,indpdb,indback,indphi,iranconf,icheckgrad,
      & inprint,i2ndstr,mucadyn,constr_dist,symetr,AFMlog,selfguide,
      & shield_mode,tor_mode,tubelog,constr_homology,homol_nset,
-     & nsaxs,saxs_mode,iprint
+     & iprint
+!... minim = .true. means DO minimization.
       logical minim,refstr,pdbref,outpdb,outmol2,overlapsc,energy_dec,
-     & mremd_dec,sideadd,lsecondary,read_cart,unres_pdb,
-     & vdisulf,searchsc,lmuca,dccart,extconf,out1file,
+     & mremd_dec,sideadd,lsecondary,read_cart,unres_pdb,out_cart,
+     & out_int,vdisulf,searchsc,lmuca,dccart,extconf,out1file,gmatout,
      & gnorm_check,gradout,split_ene,with_theta_constr,
      & with_dihed_constr,read2sigma,start_from_model,read_homol_frag,
-     & out_template_coord,out_template_restr
-      real*8 Psaxs(maxsaxs),distsaxs(maxsaxs),CSAXS(3,maxsaxs),wsaxs0,
-     & scal_rad, saxs_cutoff
-      real*8 waga_homology
-      real*8 waga_dist, waga_angle, waga_theta, waga_d, dist_cut,
-     &  dist2_cut
+     & out_template_coord,out_template_restr,usampl,loc_qlike,adaptive
       double precision aincr
       common /cntrl/ aincr,modecalc,iscode,indpdb,indback,indphi,
      & iranconf,
      & icheckgrad,minim,i2ndstr,refstr,pdbref,outpdb,outmol2,iprint,
      & overlapsc,energy_dec,mremd_dec,sideadd,lsecondary,read_cart,
-     & unres_pdb,vdisulf,searchsc,lmuca,dccart,mucadyn,extconf,out1file,
-     & selfguide,AFMlog,shield_mode,tor_mode,tubelog,
-     & constr_dist,gnorm_check,gradout,split_ene,with_theta_constr,
-     & with_dihed_constr,symetr,
-     & constr_homology,homol_nset,read2sigma,start_from_model,
+     & unres_pdb,out_cart,out_int,vdisulf,searchsc,lmuca,dccart,mucadyn,
+     & extconf,out1file,gmatout,selfguide,AFMlog,shield_mode,tor_mode,
+     & tubelog,constr_dist,gnorm_check,gradout,split_ene,
+     & with_theta_constr,with_dihed_constr,symetr,usampl,loc_qlike,
+     & adaptive,constr_homology,homol_nset,read2sigma,start_from_model,
      & read_homol_frag,out_template_coord,out_template_restr
-      common /homol/ waga_homology(maxprocs/20),
-     & waga_dist, waga_angle, waga_theta, waga_d, dist_cut,dist2_cut
-      common /saxsretr/Psaxs,distsaxs,csaxs,Wsaxs0,scal_rad,saxs_cutoff,
-     & nsaxs,saxs_mode
-C... minim = .true. means DO minimization.
-C... energy_dec = .true. means print energy decomposition matrix