X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=source%2Fcluster%2Fwham%2Fsrc%2Fenergy_p_new.F;h=f0d81cdd68018f5ef1b7494608df30488ca3d749;hb=cf3326626ac8259603af771cff53fbe83101463c;hp=8ce7e5b082587cebaedc9c5523fb655fab8f62c7;hpb=3d6f9e7811a3341955e6fdda721ab6de34efe252;p=unres.git

diff --git a/source/cluster/wham/src/energy_p_new.F b/source/cluster/wham/src/energy_p_new.F
index 8ce7e5b..f0d81cd 100644
--- a/source/cluster/wham/src/energy_p_new.F
+++ b/source/cluster/wham/src/energy_p_new.F
@@ -2876,6 +2876,7 @@ C
       include 'COMMON.VAR'
       include 'COMMON.INTERACT'
       include 'COMMON.IOUNITS'
+      include 'COMMON.CONTROL'
       dimension ggg(3)
       ehpb=0.0D0
 cd      write(iout,*)'edis: nhpb=',nhpb,' fbr=',fbr
@@ -2908,6 +2909,12 @@ cd          write (iout,*) "eij",eij
         else if (ii.gt.nres .and. jj.gt.nres) then
 c Restraints from contact prediction
           dd=dist(ii,jj)
+         if (constr_dist.eq.11) then
+            ehpb=ehpb+fordepth(i)**4.0d0
+     &          *rlornmr1(dd,dhpb(i),dhpb1(i),forcon(i))
+            fac=fordepth(i)**4.0d0
+     &          *rlornmr1prim(dd,dhpb(i),dhpb1(i),forcon(i))/dd
+         else
           if (dhpb1(i).gt.0.0d0) then
             ehpb=ehpb+2*forcon(i)*gnmr1(dd,dhpb(i),dhpb1(i))
             fac=forcon(i)*gnmr1prim(dd,dhpb(i),dhpb1(i))/dd
@@ -2925,7 +2932,8 @@ C
 C Evaluate gradient.
 C
             fac=waga*rdis/dd
-          endif  
+          endif !end dhpb1(i).gt.0
+         endif !end const_dist=11
           do j=1,3
             ggg(j)=fac*(c(j,jj)-c(j,ii))
           enddo
@@ -2941,6 +2949,20 @@ C
 C Calculate the distance between the two points and its difference from the
 C target distance.
           dd=dist(ii,jj)
+C          write(iout,*) "after",dd
+          if (constr_dist.eq.11) then
+            ehpb=ehpb+fordepth(i)**4.0d0
+     &          *rlornmr1(dd,dhpb(i),dhpb1(i),forcon(i))
+            fac=fordepth(i)**4.0d0
+     &          *rlornmr1prim(dd,dhpb(i),dhpb1(i),forcon(i))/dd
+C            ehpb=ehpb+fordepth(i)**4*rlornmr1(dd,dhpb(i),dhpb1(i))
+C            fac=fordepth(i)**4*rlornmr1prim(dd,dhpb(i),dhpb1(i))/dd
+C            print *,ehpb,"tu?"
+C            write(iout,*) ehpb,"btu?",
+C     & dd,dhpb(i),dhpb1(i),fordepth(i),forcon(i)
+C          write (iout,'(a6,2i5,3f8.3)') "edisl",ii,jj,
+C     &    ehpb,fordepth(i),dd
+           else   
           if (dhpb1(i).gt.0.0d0) then
             ehpb=ehpb+2*forcon(i)*gnmr1(dd,dhpb(i),dhpb1(i))
             fac=forcon(i)*gnmr1prim(dd,dhpb(i),dhpb1(i))/dd
@@ -2958,6 +2980,7 @@ C Evaluate gradient.
 C
             fac=waga*rdis/dd
           endif
+          endif
 cd      print *,'i=',i,' ii=',ii,' jj=',jj,' dhpb=',dhpb(i),' dd=',dd,
 cd   &   ' waga=',waga,' fac=',fac
             do j=1,3
@@ -2978,7 +3001,7 @@ C Cartesian gradient in the SC vectors (ghpbx).
           enddo
         endif
       enddo
-      ehpb=0.5D0*ehpb
+      if (constr_dist.ne.11) ehpb=0.5D0*ehpb
       return
       end
 C--------------------------------------------------------------------------
@@ -3127,6 +3150,7 @@ c     write(iout,*) "waga_theta",waga_theta,"waga_d",waga_d
          dij=dist(i,j)
 c        write (iout,*) "dij(",i,j,") =",dij
          do k=1,constr_homology
+           if(.not.l_homo(k,ii)) cycle
            distance(k)=odl(k,ii)-dij
 c          write (iout,*) "distance(",k,") =",distance(k)
 c
@@ -3146,7 +3170,17 @@ c
            endif
          enddo
          
-         min_odl=minval(distancek)
+c         min_odl=minval(distancek)
+         do kk=1,constr_homology
+          if(l_homo(kk,ii)) then 
+            min_odl=distancek(kk)
+            exit
+          endif
+         enddo
+         do kk=1,constr_homology
+          if(l_homo(kk,ii) .and. distancek(kk).lt.min_odl) 
+     &              min_odl=distancek(kk)
+         enddo
 c        write (iout,* )"min_odl",min_odl
 #ifdef DEBUG
          write (iout,*) "ij dij",i,j,dij
@@ -3159,6 +3193,7 @@ c        write (iout,* )"min_odl",min_odl
 c Nie wiem po co to liczycie jeszcze raz!
 c            odleg3=-waga_dist(iset)*((distance(i,j,k)**2)/ 
 c     &              (2*(sigma_odl(i,j,k))**2))
+           if(.not.l_homo(k,ii)) cycle
            if (waga_dist.ge.0.0d0) then
 c
 c          For Gaussian-type Urestr
@@ -3209,6 +3244,7 @@ c            godl=dexp(((-(distance(i,j,k)**2)/(2*(sigma_odl(i,j,k))**2))
 c     &           *waga_dist)+min_odl
 c          sgodl=-godl(k)*distance(k)*sigma_odl(k,ii)*waga_dist
 c
+         if(.not.l_homo(k,ii)) cycle
          if (waga_dist.ge.0.0d0) then
 c          For Gaussian-type Urestr
 c
@@ -3299,7 +3335,7 @@ c      write (iout,*) idihconstr_start_homo,idihconstr_end_homo
       do i=idihconstr_start_homo,idihconstr_end_homo
         kat2=0.0d0
 c        betai=beta(i,i+1,i+2,i+3)
-        betai = phi(i+3)
+        betai = phi(i)
 c       write (iout,*) "betai =",betai
         do k=1,constr_homology
           dih_diff(k)=pinorm(dih(k,i)-betai)
@@ -4018,7 +4054,7 @@ C
           coskt(k)=dcos(k*theti2)
           sinkt(k)=dsin(k*theti2)
         enddo
-        if (i.gt.3  .and. itype(i-3).ne.ntyp1) then
+        if (i.gt.3 .and. itype(max0(i-3,1)).ne.ntyp1) then
 #ifdef OSF
           phii=phi(i)
           if (phii.ne.phii) phii=150.0
@@ -5133,6 +5169,7 @@ c      write (iout,*) "EBACK_SC_COR",iphi_start,iphi_end,nterm_sccor
       esccor=0.0D0
       do i=itau_start,itau_end
         esccor_ii=0.0D0
+        if ((itype(i-2).eq.ntyp1).or.(itype(i-1).eq.ntyp1)) cycle
         isccori=isccortyp(itype(i-2))
         isccori1=isccortyp(itype(i-1))
         phii=phi(i)