X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=examples%2Funres%2Fnew%2FMREMD%2Fff_gab%2F1L2Y_MREMD.inp.orig;fp=examples%2Funres%2Fnew%2FMREMD%2Fff_gab%2F1L2Y_MREMD.inp.orig;h=d667dde3d1e271b1699d3033f4377db45daaa36c;hb=7308760ff07636ef6b1ee28d8c3a67a23c14b34b;hp=0000000000000000000000000000000000000000;hpb=9a54ab407f6d0d9d564d52763b3e2136450b9ffc;p=unres.git diff --git a/examples/unres/new/MREMD/ff_gab/1L2Y_MREMD.inp.orig b/examples/unres/new/MREMD/ff_gab/1L2Y_MREMD.inp.orig new file mode 100644 index 0000000..d667dde --- /dev/null +++ b/examples/unres/new/MREMD/ff_gab/1L2Y_MREMD.inp.orig @@ -0,0 +1,18 @@ +1L2Y MREMD simulation with Berendsen thermostat and A-MTS algorithm in ff_1l2y +SEED=-3059743 PDBREF RE EXTCONF RESCALE_MODE=2 constr_dist +nstep=1000000 ntwe=10000 ntwx=10000 dt=0.20 damax=10.0 lang=0 tbf & +tau_bath=1.0 t_bath=300 reset_vel=10000 respa ntime_split=1 maxtime_split=64 +nrep=16 nstex=100000 tlist mlist traj1file rest1file sync nsyn=100000 + 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 + 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 +WLONG=1.35279 WSCP=1.59304 WELEC=0.71534 WBOND=1.00000 WANG=1.13873 & +WSCLOC=0.16258 WTOR=1.98599 WTORD=1.57069 WCORRH=0.42887 WCORR5=0.00000 & +WCORR6=0.00000 WEL_LOC=0.16036 WTURN3=1.68722 WTURN4=0.66230 WTURN6=0.00000 & +WVDWPP=0.11371 WHPB=1.00000 & +CUTOFF=7.00000 WCORR4=0.00000 WSCCOR=0.0 +../../1L2Y.pdb +22 + D ASN LEU TYR ILE GLN TRP LEU LYS ASP GLY GLY PRO SER SER GLY ARG PRO PRO PRO + SER D + 0 + 0