X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=examples%2Funres%2Fnew%2FMD%2FDYN_SS%2Fss%2F4%2Fsmall.out_GB000;h=391f6b97b96c2a5c9ea23cba831682de01c3609b;hb=0d1494aeda89131d05f85d6ca47e8daa150c0ec3;hp=f6922be06c20ca1415f5cd429e7d87e050be1490;hpb=c2f78e399d8319a61116e8cb9833cfc6fca9aeb3;p=unres.git diff --git a/examples/unres/new/MD/DYN_SS/ss/4/small.out_GB000 b/examples/unres/new/MD/DYN_SS/ss/4/small.out_GB000 index f6922be..391f6b9 100644 --- a/examples/unres/new/MD/DYN_SS/ss/4/small.out_GB000 +++ b/examples/unres/new/MD/DYN_SS/ss/4/small.out_GB000 @@ -30,8 +30,8 @@ United-residue force field calculation - parallel job. ******************************************************************************** ### LAST MODIFIED 03/28/12 23:29 by czarek ++++ Compile info ++++ - Version 3.1 build 36 - compiled Thu Nov 8 11:27:35 2012 + Version 3.1 build 37 + compiled Fri Nov 9 10:29:43 2012 compiled by czarek@piasek3 OS name: Linux OS release: 2.6.32-42-generic @@ -340,24 +340,24 @@ GLY 18 3.800 90.000 180.000 0.000 180.000 180.000 Virtual-chain energies: -EVDW= -1.784016E+01 WEIGHT= 1.000000D+00 (SC-SC) -EVDW2= 2.118779E+01 WEIGHT= 2.794050D+00 (SC-p) -EES= -8.122745E+00 WEIGHT= 1.173269D-01 (p-p) -EVDWPP= -2.540621E+01 WEIGHT= 1.458100D-01 (p-p VDW) -ESTR= 4.237046E-27 WEIGHT= 1.000000D+00 (stretching) -EBE= -1.185178E+00 WEIGHT= 1.956840D+00 (bending) -ESC= 1.520408E+02 WEIGHT= 1.701000D-01 (SC local) -ETORS= 0.000000E+00 WEIGHT= 1.647115D+00 (torsional) -ETORSD= -2.194244E+00 WEIGHT= 1.058472D+00 (double torsional) -EHPB= 7.078896E+03 WEIGHT= 1.000000D+00 (SS bridges & dist. cnstr.) -ECORR4= -5.324225E+00 WEIGHT= 8.744941D-01 (multi-body) -ECORR5= 2.317900E+01 WEIGHT= 9.728750D-03 (multi-body) -ECORR6= 1.215220E+01 WEIGHT= 1.981519D-03 (multi-body) -EELLO= 3.759544E+01 WEIGHT= 7.602761D-01 (electrostatic-local) -ETURN3= -3.193381E+00 WEIGHT= 1.818280D+00 (turns, 3rd order) -ETURN4= 1.424793E+01 WEIGHT= 3.466334D-01 (turns, 4th order) -ETURN6= 0.000000E+00 WEIGHT= 6.393807D-03 (turns, 6th order) -ESCCOR= 7.779132E+00 WEIGHT= 8.046559D-01 (backbone-rotamer corr) +EVDW= -1.784016E+01 WEIGHT= 1.000000E+00 (SC-SC) +EVDW2= 2.118779E+01 WEIGHT= 2.794050E+00 (SC-p) +EES= -8.122745E+00 WEIGHT= 1.173269E-01 (p-p) +EVDWPP= -2.540621E+01 WEIGHT= 1.458100E-01 (p-p VDW) +ESTR= 4.237046E-27 WEIGHT= 1.000000E+00 (stretching) +EBE= -1.185178E+00 WEIGHT= 1.956840E+00 (bending) +ESC= 1.520408E+02 WEIGHT= 1.701000E-01 (SC local) +ETORS= 0.000000E+00 WEIGHT= 1.647115E+00 (torsional) +ETORSD= -2.194244E+00 WEIGHT= 1.058472E+00 (double torsional) +EHPB= 7.073396E+03 WEIGHT= 1.000000E+00 (SS bridges & dist. cnstr.) +ECORR4= -5.324225E+00 WEIGHT= 8.744941E-01 (multi-body) +ECORR5= 2.317900E+01 WEIGHT= 9.728750E-03 (multi-body) +ECORR6= 1.215220E+01 WEIGHT= 1.981519E-03 (multi-body) +EELLO= 3.759544E+01 WEIGHT= 7.602761E-01 (electrostatic-local) +ETURN3= -3.193381E+00 WEIGHT= 1.818280E+00 (turns, 3rd order) +ETURN4= 1.424793E+01 WEIGHT= 3.466334E-01 (turns, 4th order) +ETURN6= 0.000000E+00 WEIGHT= 6.393807E-03 (turns, 6th order) +ESCCOR= 7.779132E+00 WEIGHT= 8.046559E-01 (backbone-rotamer corr) EDIHC= 0.000000E+00 (dihedral angle constraints) ESS= -5.500000E+00 (disulfide-bridge intrinsic energy) UCONST= 0.000000E+00 (Constraint energy) @@ -115776,26 +115776,26 @@ Momenta zeroed out, time 4267.56 =================================== Timing =================================== - MD calculations setup: 4.72656E-01 - Energy & gradient evaluation: 1.77100E+03 + MD calculations setup: 1.13281E-01 + Energy & gradient evaluation: 1.45762E+03 Stochastic MD setup: 0.00000E+00 Stochastic MD step setup: 0.00000E+00 - MD steps: 1.77803E+03 + MD steps: 1.46341E+03 ============================ End of MD calculation =========================== CG processor 0 is finishing work. - Total wall clock time 1779.30468750000 sec + Total wall clock time 1463.81250000000 sec ================================================================================ Details of FG communication time ================================================================================ - BROADCAST: 4.16797E+00 - REDUCE: 1.17109E+01 + BROADCAST: 4.54688E+00 + REDUCE: 1.11367E+01 GATHER: 0.00000E+00 - SCATTER: 1.51562E+00 + SCATTER: 1.75391E+00 SENDRECV: 0.00000E+00 - BARRIER ene 2.00000E+00 - BARRIER grad 3.39062E+00 + BARRIER ene 2.05859E+00 + BARRIER grad 3.48828E+00 ---------------------------------------- - TOTAL: 2.27852E+01 + TOTAL: 2.29844E+01 ================================================================================