X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=examples%2Funres%2Fnew%2FMD%2FDYN_SS%2Fdyn_ss%2Fsmall.inp;fp=examples%2Funres%2Fnew%2FMD%2FDYN_SS%2Fdyn_ss%2Fsmall.inp;h=5b0269f111c512ef7d5650969d4140d4788f2b15;hb=fbb1880ba2f52309ca4d0545f1799a181ffcbd81;hp=0000000000000000000000000000000000000000;hpb=6ae06e1476f4f0d7caba44ecbe0aacc9c1982c2f;p=unres.git diff --git a/examples/unres/new/MD/DYN_SS/dyn_ss/small.inp b/examples/unres/new/MD/DYN_SS/dyn_ss/small.inp new file mode 100644 index 0000000..5b0269f --- /dev/null +++ b/examples/unres/new/MD/DYN_SS/dyn_ss/small.inp @@ -0,0 +1,21 @@ +small +SEED=-1111333 MD ONE_LETTER +nstep=20000 dt=0.1 ntwe=1000 ntwx=300 lang=0 tbf tau_bath=1.0 t_bath=400 & +reset_moment=1000 reset_vel=0 damax=5.0 eq_time=1000 MDPDB +WSC=1.00000 WSCP=2.79405 WELEC=0.14581 WANG=1.95684 WSCLOC=0.17010 & +WTOR=2.04698 WTORD=1.69624 WCORRH=1.84615 WCORR5=0.02730 WCORR6=0.00741 & +WEL_LOC=1.21837 WTURN3=2.91386 WTURN4=0.73178 WTURN6=0.02391 WBOND=1.0 & +CUTOFF=7.00000 WCORR4=0.00000 DYN_SS +18 +GAAACAAAAAAAACAAAG +2 5 14 +0 5 14 + 0 + 90.0000 90.0000 90.0000 90.000 90.000 90.000 90.000 90.000 + 90.0000 90.0000 90.0000 90.000 90.000 90.000 90.000 90.000 + 180.0000 180.0000 180.0000 180.000 180.000 180.000 180.000 180.000 + 180.0000 180.0000 180.0000 180.000 180.000 180.000 180.000 180.000 + 110.0000 110.0000 110.0000 100.000 110.000 100.000 110.000 110.000 + 110.0000 110.0000 110.0000 100.000 110.000 100.000 110.000 110.000 + -120.0000 -120.0000 -120.000 -120.000 -120.000 -120.000 -120.000 -120.000 + -120.0000 -120.0000 -120.000 -120.000 -120.000 -120.000 -120.000 -120.000