X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=examples%2FUNRES-Dock%2Fstart_unres_example.mat;fp=examples%2FUNRES-Dock%2Fstart_unres_example.mat;h=d1a86dda35a56c5fc74a2c7ca9f85f8614de2ba3;hb=018446aca1e32faf80f41e818acbfc61e5d872c9;hp=b7a05e2065f2fa14c000acc80f5cb226463e2dac;hpb=88d4f45c783f3644ff7ae49572b7b609ef3c9617;p=unres.git diff --git a/examples/UNRES-Dock/start_unres_example.mat b/examples/UNRES-Dock/start_unres_example.mat index b7a05e2..d1a86dd 100644 --- a/examples/UNRES-Dock/start_unres_example.mat +++ b/examples/UNRES-Dock/start_unres_example.mat @@ -1,6 +1,6 @@ #PBS -N test #PBS -q dell -#PBS -l nodes=4:ppn=12 +#PBS -l nodes=8:ppn=12 #PBS -l walltime=48:00:00 setenv MPIRUN "/users/software/mpich2-1.4.1p1_intel/bin/mpirun " @@ -8,16 +8,16 @@ setenv NPROCS `cat $PBS_NODEFILE | wc -l` cd $PBS_O_WORKDIR -setenv FGPROCS 2 +setenv FGPROCS 4 setenv POT GB setenv PREFIX unres_dock setenv OUT1FILE YES #-------------------------------------------------------- -setenv UNRES_BIN /users2/vetinari/unres_hom_m/unres//bin/unresMD-mult_ifort_MPI_E0LL2Y.exe +setenv UNRES_BIN UUU/build/bin/unresMD-mult_ifort_MPI_E0LL2Y.exe setenv LD_LIBRARY_PATH /users/software/mpich2-1.4.1p1_intel/lib:$LD_LIBRARY_PATH #----------------------------------------------------------------------------- -setenv DD /users2/vetinari/unres_hom_m/unres//unres/PARAM +setenv DD UUU/PARAM setenv BONDPAR $DD/bond_AM1_ext_dum.parm setenv THETPAR $DD/pot_theta_G631_DIL_ext.parm setenv THETPARPDB $DD/thetaml_ext.5parm