X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=ctest%2Fprota_unres_energy_check.sh;h=c6e52b32e5c92909b71c33779612271632aa07a0;hb=5464a69bec1071f24a02d91a6c4483c3ace66c04;hp=3cd5b161c2d4cc842bc80bad0651e5ec24cb2f57;hpb=448d3fa03a35e72321187b33bbc3a05b2ba01b3a;p=unres.git diff --git a/ctest/prota_unres_energy_check.sh b/ctest/prota_unres_energy_check.sh index 3cd5b16..c6e52b3 100755 --- a/ctest/prota_unres_energy_check.sh +++ b/ctest/prota_unres_energy_check.sh @@ -1,6 +1,7 @@ #!/bin/bash # # Writen by Dawid Jagieła and Adam Sieradzan +# and Cezary Czaplewski # # #---------------------------------------- @@ -16,11 +17,11 @@ fi if [ "$1" == "prota_ENE" ]; then extremediff="10000.0" # extreme energy difference, comething went terribly wrong - expectenergy="-56066670.000000" # expected total energy - cutoffdiff="0.1" # energy cutoff variation - more then this rises warning + expectenergy="145.1742" # - expected total energy + cutoffdiff="0.01" # energy cutoff variation - more then this rises warning elif [ "$1" == "prota_MIN_CART" ]; then extremediff="10.0" # extreme energy difference, comething went terribly wrong - expectenergy="123.8713" # expected total energy + expectenergy="154.9622" # - expected total energy cutoffdiff="0.1" # energy cutoff variation - more then this rises warning sumsl_return=`grep SUMSL $file|awk '{print $4}'` @@ -29,20 +30,192 @@ elif [ "$1" == "prota_MIN_CART" ]; then echo 'ERROR = SUMSL return code' $sumsl_return 'is not 4' exit 1 fi +elif [ "$1" == "1l2y_MIN_INT" ]; then + extremediff="10.0" # extreme energy difference, comething went terribly wrong + expectenergy="-47.88137" # expected total energy + cutoffdiff="0.1" # energy cutoff variation - more then this rises warning + + sumsl_return=`grep SUMSL $file|awk '{print $4}'` + echo 'SUMSL return code' $sumsl_return + if [ "$sumsl_return" != "4" ]; then + echo 'ERROR = SUMSL return code' $sumsl_return 'is not 4' + exit 1 + fi +elif [ "$1" == "1l2y_MIN_REGULAR_INT" ]; then + extremediff="10.0" # extreme energy difference, comething went terribly wrong + expectenergy="5.258893" # expected total energy +# +# something wrong with REGULAR and sometimes gives code 8 and different energy +# for now 8 is only warning and cutoffdiff is large +# + cutoffdiff="6.0" # energy cutoff variation - more then this rises warning + + sumsl_return=`grep "SUMSL return code:" $file|awk '{print $4}'` + echo 'SUMSL return code' $sumsl_return + if [ "$sumsl_return" != "4" ]; then + echo 'WARNING = SUMSL return code' $sumsl_return 'is not 4' + fi + elif [ "$1" == "1l2y_micro" ]; then + refe="74.2623" + stat=`awk '{if ( $1 != "#" ) {n++;a=a+$5;a2=a2+$5^2}}END{print a/n,sqrt((a2-a^2/n)/n)}' $file_stat` + array=(${stat// / }) + echo 'average total energy ' ${array[0]} + echo 'standard deviation ' ${array[1]} + if [ `echo "a=${array[0]}-${refe};if(0>a)a*=-1;a>5.0"|bc -l` != "0" ]; then + echo 'difference ' `echo "a=${array[0]}-${refe};if(0>a)a*=-1;a"|bc -l` "from reference ave etot ${refe} greater than 5.0" + exit 1 + elif [ `echo "a=${array[1]};a>0.15"|bc -l` != "0" ]; then + echo 'standard deviation greater than 0.15' + exit 1 + else + exit 0 + fi +elif [ "$1" == "1L2Y_L" ] || [ "$1" == "1L2Y_NH" ]; then + if [ ! -s $file_stat ]; then + echo 'FATAL error - stat file empty' + exit 2 + fi + chi2=`./matplotlib_fit_hist.py $file_stat 111` + echo 'Chi2 for fitting theoretical temperature distribution ' ${chi2} + echo "`pwd`/${file_stat}.png" + + if [ `echo "a=${chi2};a>0.001"|bc -l` != "0" ]; then + echo 'chi2 greater than 0.001' + exit 1 + else + exit 0 + fi +elif [ "$1" == "1L2Y_B" ]; then + if [ ! -s $file_stat ]; then + echo 'FATAL error - stat file empty' + exit 2 + fi + chi2=`./matplotlib_fit_hist.py $file_stat 111` + echo 'Chi2 for fitting theoretical temperature distribution ' ${chi2} + echo "`pwd`/${file_stat}.png" + + if [ `echo "a=${chi2};a>0.01"|bc -l` != "0" ]; then + echo 'chi2 greater than 0.01' + exit 1 + else + exit 0 + fi + + +elif [ "$1" == "1L2Y_remd" ]; then + rm -rf remd_all.stat + tail -q -n +1000 1L2Y_remd*.stat >remd_all.stat + if [ ! -s remd_all.stat ]; then + echo 'FATAL error - stat files empty' + exit 2 + fi + ./matplotlib_hist.py + + echo "`pwd`/1L2Y_remd_ene_hist.png" + echo "`pwd`/1L2Y_remd_Tene.png" + grep ACC 1L2Y_remd.out_GB000 |tail -7 + exchange=`grep ACC 1L2Y_remd.out_GB000 |tail -7|awk '{a=a+$4}END{print a/NR}'` + echo "average exchange = ${exchange}" + if [ `echo "a=${exchange};a<0.2"|bc -l` != "0" ]; then + echo 'ERROR average exchange smaller than 0.2' + exit 1 + else + exit 0 + fi + +elif [ "$1" == "1DKZcut-ber" ]; then + chi2=`./matplotlib_fit_hist.py $file_stat 519` + echo 'Chi2 for fitting theoretical temperature distribution ' ${chi2} + echo "`pwd`/${file_stat}.png" + + if [ `echo "a=${chi2};a>0.01"|bc -l` != "0" ]; then + echo 'chi2 greater than 0.01' + exit 1 + else + exit 0 + fi + +elif [ "$1" == "1DKZcut-lang" ]; then + chi2=`./matplotlib_fit_hist.py $file_stat 519` + echo 'Chi2 for fitting theoretical temperature distribution ' ${chi2} + echo "`pwd`/${file_stat}.png" + + if [ `echo "a=${chi2};a>0.001"|bc -l` != "0" ]; then + echo 'chi2 greater than 0.001' + exit 1 + else + exit 0 + fi + +elif [ "$1" == "1DKZcut-min" ]; then + extremediff="10.0" # extreme energy difference, comething went terribly wrong + expectenergy="332.1213" # - expected total energy + cutoffdiff="3.0" # energy cutoff variation - more then this rises warning + + sumsl_return=`grep SUMSL $file|awk '{print $4}'` + echo 'SUMSL return code' $sumsl_return + if [ "$sumsl_return" != "4" ]; then + echo 'ERROR = SUMSL return code' $sumsl_return 'is not 4' + echo 'but not failing this test, it is known problem with esccor' +# exit 1 + fi + +elif [ "$1" == "1DKZcut-ene" ]; then + extremediff="10000.0" # extreme energy difference, comething went terribly wrong + expectenergy="-452.4430" # - expected total energy + cutoffdiff="0.01" # energy cutoff variation - more then this rises warning + +elif [ "$1" == "1DKZcut-micro" ]; then + refe="-173.573" stat=`awk '{if ( $1 != "#" ) {n++;a=a+$5;a2=a2+$5^2}}END{print a/n,sqrt((a2-a^2/n)/n)}' $file_stat` array=(${stat// / }) echo 'average total energy ' ${array[0]} echo 'standard deviation ' ${array[1]} - if [ `echo "a=${array[0]}-103.162;if(0>a)a*=-1;a>5.0"|bc -l` != "0" ]; then - echo 'difference ' `echo "a=${array[0]}-103.162;if(0>a)a*=-1;a"|bc -l` 'from reference ave etot 103.162 greater than 5.0' + if [ `echo "a=${array[0]}-(${refe});if(0>a)a*=-1;a>5.0"|bc -l` != "0" ]; then + echo 'difference ' `echo "a=${array[0]}-${refe};if(0>a)a*=-1;a"|bc -l` "from reference ave etot ${refe} greater than 5.0" exit 1 - elif [ `echo "a=${array[1]};a>0.01"|bc -l` != "0" ]; then - echo 'standard deviation greater than 0.01' + elif [ `echo "a=${array[1]};a>0.005"|bc -l` != "0" ]; then + echo 'standard deviation greater than 0.005' exit 1 else exit 0 fi + +elif [ "$1" == "1ei0_min" ]; then + extremediff="10.0" # extreme energy difference, comething went terribly wrong + expectenergy="151.3218" # - expected total energy + cutoffdiff="6.0" # energy cutoff variation - more then this rises warning + + refe="134.8382" + startene=`grep ETOT $file|head -1| awk '{print $2*1.0}'` + echo "initial energy=${startene} reference=${refe}" + if [ `echo "a=${startene}-(${refe});if(0>a)a*=-1;a>0.01"|bc -l` != "0" ]; then + echo 'difference ' `echo "a=${startene}-${refe};if(0>a)a*=-1;a"|bc -l` "from reference etot ${refe} greater than 0.01" + exit 1 + fi + + sumsl_return=`grep SUMSL $file|awk '{print $4}'` + echo 'SUMSL return code' $sumsl_return + if [ "$sumsl_return" != "4" ]; then + echo 'ERROR = SUMSL return code' $sumsl_return 'is not 4' + echo 'but not failing this test, it is known problem with dissulfides' +# exit 1 + fi + +elif [ "$1" == "prota_CHECKGRAD" ]; then + diff=`awk -f checkgrad.awk $file |grep 'Largest abs(numerical/analytical)='|awk '{printf "%15.10f",$3}'` + awk -f checkgrad.awk $file + + if [ `echo "a=${diff};a>0.0001"|bc -l` != "0" ]; then + echo 'ERROR largest abs(numerical/analytical)' ${diff} + echo ' greater than 0.0001' + exit 1 + else + exit 0 + fi + + else exit 1 fi